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Information on SUBCLASS 5.6.1
Subclass Accession number: 8569
Subclass: 5.6.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 13.3 +/- 16.8
Average RMSD (Å) : 0.580 +/- 0.155

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXchXpphX
(φψ)-conformation: aalaaaabb
Pattern: xxx[AFLTV]x[ADEKNQ][ailmy][AILV][EHKNRT]xx[DGKN][ACILM][degqrs][dehkp][knrty][FILTVW]x[afgilv]
Conservation:-0.952-1.010-1.1330.399-0.9560.4650.1732.3320.559-1.232-0.7321.3151.624-0.4910.487-0.4710.169-0.7310.184
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1db3_A_1071db3   A109127TLRLLEAIRFLGLEKKTRFHHHHHHHHHHTT-TTT-EEaaaaaaaaaaavaaaaxbb
1dg9_A_181dg9   A2341EAVFRKLVTDQNISDNWVIHHHHHHHHHHTT-GGGEEEaaaaaaaaaaalaaaabbb
1e8g_A_1481e8g   A148165YHDLHNYLEANNLRDKLW.HHHHHHHHHHTT-TTTEE.aaaaaaaaaaalaaaabb.
1f3l_A_2861f3l   A287305LYQAMDIIRLNKLEDTIVLHHHHHHHHHHTT-TTTEEEaaaaaaaaaaavaaaabbb
1h1d_A_931h1d   A96114AAITQQMLNFAGLQDKVTIHHHHHHHHHHHT-TTTEEEaaaaaaaaaaavaaaabbx
1h8e_A_2101h8e   A213231VAQLVKRLTDADAMKYTIVHHHHHHHHHHTT-GGGEEEaaaaaaaaaaalaaaabbb
1k6w_A_2251k6w   A226244VETVAALAHHEGMGARVTAHHHHHHHHHHHT-GGGEEEaaaaaaaaaaalaaaabbb
1nln_A_51nln   A523EQELKAIVKDLGCGPYFLGHHHHHHHHHHTT-GGGEEEaaaaaaaaaaavaaaaxae
1or8_A_1041or8   A105123SDYAVKIVKANKLDHVVTIHHHHHHHHHHTT-TTTEEEaaaaaaaaaaalaaaabbx
5pnt_*_195pnt   -2341EAVFRKLVTDQNISENWRVHHHHHHHHHHTT-GGGEEEaaaaaaaaaaavaaaabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dg9_A_181dg9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID R - 18
1dg9_A_181dg9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID S - 19
1dg9_A_181dg9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID P - 20
1e8g_A_1481e8g   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 148
1f3l_A_2861f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 286
1h1d_A_931h1d   A     SAMS-ADENOSYLMETHIONINE Y - 95
1k6w_A_2251k6w   A     FEFE (III) ION H - 246
1or8_A_1041or8   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 104
5pnt_*_195pnt   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID S - 19
5pnt_*_195pnt   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID P - 20

Clusters included in this Subclass
CLUSTER: HE.6.23