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Information on SUBCLASS 5.11.1
Subclass Accession number: 8584
Subclass: 5.11.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 22.1 +/- 21.7
Average RMSD (Å) : 0.691 +/- 0.327

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XppXhXGhX
(φψ)-conformation: aabpppgbb
Pattern: x[adkqr][almt]x[ehknqrsy][dek][DHPST][pv][adps][DEG][fiktv][stv][afglw]
Conservation:-0.595-0.352-0.036-0.605-0.3220.1510.4780.831-0.7232.875-0.109-0.939-0.653
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a5t_*_1221a5t   -129141LKTLEEPPAETWFHHHHTS--TTEEEaaaaabpxplbbb
1gkz_A_1551gkz   A177188HLALHEDKPDFV.HHHTTS--TTEE.aaaaaxbbxvbb.
1j7d_B_61j7d   B1325QRLLAEPVPGIKAHHHTTS--TTEEEaaaaIbpxxvbbb
1jat_A_61jat   A1325EKLVSDPVPGITAHHHHHS--TTEEEaaaaabpxpvbbb
1lk9_A_1661lk9   A170182EQTKYFDKKGYVWHHHHHS--TTEEEaaaaaxxxxgbbx
1mv8_A_4041mv8   A404416VDLVNKTPSGKKLHHHHHS--TT-EEaaaaabxwxvbbb
1pzv_A_51pzv   A1325ADMRRVPVDGFSAHHHHHS--TTEEEaaaaabxxpvbbb
1q34_A_41q34   A1426KKLQEDPPAGVSGHHHHHS--TTEEEaaaaabxxplbbe
1u9a_A_11u9a   A1426KAWRKDHPFGFVAHHHHHS--TT-EEaaaaabbpxgxbb
2aak_*_42aak   -1426KRLQQDPPAGISGHHHHHS--TTEEEaaaaabxxpvbbb
2ucz_*_32ucz   -1426QQLIKDSPPGIVAHHHHHS--TTEEEaaaaabxppvbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gkz_A_1551gkz   A     XEXENON I - 170
1gkz_A_1551gkz   A     XEXENON R - 171
1gkz_A_1551gkz   A     XEXENON A - 174
1lk9_A_1661lk9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID V - 167
1lk9_A_1661lk9   A     PLPPYRIDOXAL-5'-PHOSPHATE F - 168
1lk9_A_1661lk9   A     FCAALPHA-D-FUCOSE R - 169
1lk9_A_1661lk9   A     FCAALPHA-D-FUCOSE E - 170
1lk9_A_1661lk9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID E - 170
1lk9_A_1661lk9   A     FCAALPHA-D-FUCOSE Q - 171
1lk9_A_1661lk9   A     FCAALPHA-D-FUCOSE K - 173
1lk9_A_1661lk9   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 174
1lk9_A_1661lk9   A     FCAALPHA-D-FUCOSE Y - 174

Clusters included in this Subclass
CLUSTER: HE.5.71
CLUSTER: HE.6.116