Information on SUBCLASS 5.17.1 |
Subclass Accession number: 8594
Subclass: 5.17.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 45.8 +/- 22.0 Average RMSD (Å) : 0.400 +/- 0.183 Consensus geometry
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Consensus Sequence: | pppXXPRhh |
(φψ)-conformation: | aapppwpbb |
Pattern: | [G] | [IMVY] | [EKT] | [AQT] | [L] | [DKS] | [DE] | [KMT] | [ENP] | [AS] | [P] | [R] | [IL] | [FLV] | [KS] | [ST] |
Conservation: | 1.699 | -0.787 | -0.787 | -0.997 | 0.594 | -0.782 | 0.460 | -0.993 | -0.825 | -0.160 | 2.252 | 1.147 | 0.052 | -0.766 | -0.179 | 0.072 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aqu_A_92 | 1aqu | A | 92 | 107 | GIKQLKEKESPRIVKT | HHHHHHT--SS-EEEE | aaaaaaaxxxwxbbxb |
1g3m_A_91 | 1g3m | A | 91 | 106 | GVKQLDEMNSPRIVKT | HHHHHHT--SS-EEEE | aaaaaaaxxxwxbbxb |
1j99_A_81 | 1j99 | A | 83 | 98 | GYTALSETESPRLFSS | HHHHHTT--SS-EEEE | aaaaaaabxpwbbbbb |
1ls6_A_92 | 1ls6 | A | 92 | 107 | GMETLKDTPAPRLLKT | HHHHHHT--SS-EEEE | aaaaaaaxwxwxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aqu_A_92 | 1aqu | A | ESTESTRADIOL | K - 106 |
1g3m_A_91 | 1g3m | A | A3PADENOSINE-3'-5'-DIPHOSPHATE | K - 105 |
1g3m_A_91 | 1g3m | A | PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL | K - 105 |
1j99_A_81 | 1j99 | A | AND3-BETA-HYDROXY-5-ANDROSTEN-17-ONE | I - 82 |
1j99_A_81 | 1j99 | A | HGIMERCURY (II) IODIDE | L - 95 |
1ls6_A_92 | 1ls6 | A | NPOP-NITROPHENOL | T - 95 |
1ls6_A_92 | 1ls6 | A | A3PADENOSINE-3'-5'-DIPHOSPHATE | K - 106 |
1ls6_A_92 | 1ls6 | A | NPOP-NITROPHENOL | K - 106 |
Clusters included in this Subclass |
CLUSTER: HE.5.239 |
CLUSTER: HE.6.217 |