Information on SUBCLASS 5.21.1 |
Subclass Accession number: 8599
Subclass: 5.21.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 14.4 +/- 22.8 Average RMSD (Å) : 1.300 +/- 0.228 Consensus geometry
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Consensus Sequence: | hXXXhppph |
(φψ)-conformation: | aapbaapbb |
Pattern: | x | x | [det] | [aglm] | x | [aglt] | [dkpt] | x | x | [NQRT] | [KNRT] | [ALVY] | x |
Conservation: | -0.415 | 0.080 | -0.331 | -1.373 | -0.511 | -1.548 | -1.047 | 0.690 | 0.156 | 0.884 | 1.315 | 0.396 | 1.705 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ayl_*_254 | 1ayl | - | 254 | 266 | KTTLSTDPKRRLI | HHHHH--TTSEEE | aaaaaxbaabxxa |
1f7u_A_446 | 1f7u | A | 460 | 472 | IQDMQGKRINNYE | HHHHSS-TT--EE | aaaaabxaaxxbx |
1g5t_A_140 | 1g5t | A | 145 | 157 | SALNARPGHQTVI | HHHHTS-TT-EEE | aaaaaxwaaxxbb |
1ii2_A_227 | 1ii2 | A | 227 | 239 | KTTLSADPHRNLI | HHHHH--TTSEEE | aaaaaxbaabxxa |
1o4s_A_152 | 1o4s | A | 154 | 166 | EVEGLLVGKTKAV | HHHHT--TTEEEE | aaaaaxbaaxabb |
1zpd_A_367 | 1zpd | A | 373 | 385 | QVEALLTPNTTVI | HHHHT--TTEEEE | aaaaaxbaaxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ayl_*_254 | 1ayl | * | ATPADENOSINE-5'-TRIPHOSPHATE | K - 254 |
1ayl_*_254 | 1ayl | * | MGMAGNESIUM ION | K - 254 |
1ayl_*_254 | 1ayl | * | ATPADENOSINE-5'-TRIPHOSPHATE | T - 255 |
1ayl_*_254 | 1ayl | * | MGMAGNESIUM ION | T - 255 |
1ayl_*_254 | 1ayl | * | ATPADENOSINE-5'-TRIPHOSPHATE | T - 256 |
1ayl_*_254 | 1ayl | * | MGMAGNESIUM ION | T - 256 |
1ayl_*_254 | 1ayl | * | ATPADENOSINE-5'-TRIPHOSPHATE | L - 257 |
1ayl_*_254 | 1ayl | * | ATPADENOSINE-5'-TRIPHOSPHATE | S - 258 |
1g5t_A_140 | 1g5t | A | MGMAGNESIUM ION | T - 159 |
1g5t_A_140 | 1g5t | A | ATPADENOSINE-5'-TRIPHOSPHATE | T - 159 |
1o4s_A_152 | 1o4s | A | PLPPYRIDOXAL-5'-PHOSPHATE | N - 169 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ayl_*_254 | 1ayl | * | ACTPUTATIVE ACTIVE SITE RESIDUES. | K - 254 |
Clusters included in this Subclass |
CLUSTER: HE.6.59 |