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Information on SUBCLASS 5.21.1
Subclass Accession number: 8599
Subclass: 5.21.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 14.4 +/- 22.8
Average RMSD (Å) : 1.300 +/- 0.228

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXXXhppph
(φψ)-conformation: aapbaapbb
Pattern: xx[det][aglm]x[aglt][dkpt]xx[NQRT][KNRT][ALVY]x
Conservation:-0.4150.080-0.331-1.373-0.511-1.548-1.0470.6900.1560.8841.3150.3961.705
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayl_*_2541ayl   -254266KTTLSTDPKRRLIHHHHH--TTSEEEaaaaaxbaabxxa
1f7u_A_4461f7u   A460472IQDMQGKRINNYEHHHHSS-TT--EEaaaaabxaaxxbx
1g5t_A_1401g5t   A145157SALNARPGHQTVIHHHHTS-TT-EEEaaaaaxwaaxxbb
1ii2_A_2271ii2   A227239KTTLSADPHRNLIHHHHH--TTSEEEaaaaaxbaabxxa
1o4s_A_1521o4s   A154166EVEGLLVGKTKAVHHHHT--TTEEEEaaaaaxbaaxabb
1zpd_A_3671zpd   A373385QVEALLTPNTTVIHHHHT--TTEEEEaaaaaxbaaxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE K - 254
1ayl_*_2541ayl   *     MGMAGNESIUM ION K - 254
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 255
1ayl_*_2541ayl   *     MGMAGNESIUM ION T - 255
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 256
1ayl_*_2541ayl   *     MGMAGNESIUM ION T - 256
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE L - 257
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE S - 258
1g5t_A_1401g5t   A     MGMAGNESIUM ION T - 159
1g5t_A_1401g5t   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 159
1o4s_A_1521o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 169
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ayl_*_2541ayl   * ACTPUTATIVE ACTIVE SITE RESIDUES.K - 254

Clusters included in this Subclass
CLUSTER: HE.6.59