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Information on SUBCLASS 5.24.1
Subclass Accession number: 8602
Subclass: 5.24.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 9.3 +/- 10.5
Average RMSD (Å) : 1.067 +/- 0.175

Consensus geometry
d (Å): 15 delta (°): 135-180 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXcXXXXhh
(φψ)-conformation: aalbpbpbb
Pattern: xx[dgnq][afiv][fhiv][nqs][aeqr][fvw]x[akqs]x[aclmt][GNR][ik][DEPS]xx[ly][aglvy]x
Conservation:-0.416-1.270-0.123-0.390-0.2010.4520.619-0.051-0.2770.637-0.6870.0892.8920.1971.338-0.355-0.9470.992-0.998-1.503
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gvf_A_281gvf   A3049TIQAILEVCSEMRSPVILAGHHHHHHHHHHHHT---EEEEaaaaaaaaaaaalbwbbbbb
1i24_A_541i24   A5473IHDRISRWKALTGKSIELYVHHHHHHHHHHHH----EEEEaaaaaaaaaaaavxbxxbbb
1lg2_A_1511lg2   A162181LANAFQQEAQTSGKERLLLSHHHHHHHHHHHH-S---EEEaaaaaaaaaaaavxxxxxbb
1nyt_A_161nyt   A1635SPFIHQQFAQQLNIEHPYGRHHHHHHHHHHHHT----EEEaaaaaaaaaaaalbxbwbbb
1req_B_5211req   B527546REGFSSPVWHIAGIDTPQVEHHHHHHHHHHHTT-B--EEEaaaaaaaaaaaavxxbwbbx
1udb_*_2691udb   -269288VLDVVNAFSKACGKPVNYHFHHHHHHHHHHHHTS---EEEaaaaaaaaaaaavbxxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gvf_A_281gvf   A     EGLETHYLENE GLYCOL Q - 32
1gvf_A_281gvf   A     EGLETHYLENE GLYCOL E - 36
1gvf_A_281gvf   A     EGLETHYLENE GLYCOL S - 43
1gvf_A_281gvf   A     EGLETHYLENE GLYCOL P - 44
1gvf_A_281gvf   A     EGLETHYLENE GLYCOL V - 45
1gvf_A_281gvf   A     EGLETHYLENE GLYCOL I - 46
1gvf_A_281gvf   A     EGLETHYLENE GLYCOL L - 47
1lg2_A_1511lg2   A     EDO1,2-ETHANEDIOL A - 183
1lg2_A_1511lg2   A     EDO1,2-ETHANEDIOL V - 184
1lg2_A_1511lg2   A     EDO1,2-ETHANEDIOL P - 185
1nyt_A_161nyt   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE S - 16
1nyt_A_161nyt   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE H - 20
1nyt_A_161nyt   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE Y - 33
1udb_*_2691udb   *     UFGURIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE V - 269

Clusters included in this Subclass
CLUSTER: HE.4.192
CLUSTER: HE.5.272
CLUSTER: HE.6.186