Information on SUBCLASS 5.25.1 |
Subclass Accession number: 8603
Subclass: 5.25.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 11.7 +/- 12.9 Average RMSD (Å) : 1.160 +/- 0.329 Consensus geometry
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Consensus Sequence: | pXGXphpXp |
(φψ)-conformation: | aalpbpabb |
Pattern: | [aegs] | x | [alv] | x | [aet] | [AGIV] | [AILMY] | [akr] | x | [AGLY] | x | [AEQS] | x | [GN] | [fr] | x | [hp] | [HKT] | x | [KQSY] | [FILW] | x | x |
Conservation: | -0.923 | -0.246 | 0.027 | -0.968 | -0.403 | 0.011 | -0.065 | 0.053 | -0.968 | -0.969 | -0.652 | 0.707 | -1.059 | 3.653 | -0.212 | 0.627 | 0.833 | 0.862 | -0.201 | 0.251 | 0.510 | -0.652 | -0.217 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c96_A_363 | 1c96 | A | 367 | 389 | GRSAAVAKQALAHGLKCKSQFTI | HHHHHHHHHHHTTT---SSEEEE | aaaaaaaaaaaaalbbxaxxbbb |
1hrk_A_199 | 1hrk | A | 201 | 223 | SSLNAIYRYYNQVGRKPTMKWST | HHHHHHHHHHHHHTS--SSEEEE | aaaaaaaaaaaaavbxxabxxbb |
1lfw_A_121 | 1lfw | A | 125 | 147 | LTAYYGMLLLKEAGFKPKKKIDF | HHHHHHHHHHHHHT---SSEEEE | aaaaaaaaaaaaavxbpabxbbx |
1lok_A_119 | 1lok | A | 123 | 145 | AAVTEVIRVLSENNFQPKRSIAF | HHHHHHHHHHHHTT---SEEEEE | aaaaaaaaaaaaalpbxabxbbb |
1njg_A_22 | 1njg | A | 22 | 44 | EHVLTALANGLSLGRIHHAYLFS | HHHHHHHHHHHHHT---SEEEEE | aaaaaaaaaaaaavxbxabbbbb |
Clusters included in this Subclass |
CLUSTER: HE.5.171 |
CLUSTER: HE.7.130 |