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Information on SUBCLASS 5.34.1
Subclass Accession number: 8612
Subclass: 5.34.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 31.6
Average RMSD (Å) : 1.050 +/- 0.507

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXphcXXh
(φψ)-conformation: aapapappb
Pattern: [DEQ][NSTV][ALV][LVY][EFQ]x[adv][AKL][AKT][ATV][HKN][CSY][DK][gk][pv][LVY][GV][FIMV][nv]
Conservation:1.888-0.6130.0310.286-0.629-1.038-1.679-0.966-0.1610.2130.9790.8592.137-0.398-0.8380.2130.2600.535-1.076
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f76_A_1201f76   A121139DNLVENVKKAHYDGVLGINHHHHHHHHH----SEEEEEaaaaaaaaaxapaxxbbbx
1nns_A_921nns   A94112ETAYFLDLTVKCDKPVVMVHHHHHHHHH----S-EEEEaaaaaaaaaxaxaxpbbbb
1nw3_A_1681nw3   A168186QVVLQVAAATNCKHHYGVEHHHHHHHHH---SEEEEEEaaaaaaaaabaxabbbbbb
1o7j_A_981o7j   A100118ESAYFLHLTVKSDKPVVFVHHHHHHHHH----S-EEEEaaaaaaaaaxabaxwbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f76_A_1201f76   A     FMNFLAVIN MONONUCLEOTIDE N - 139
1f76_A_1201f76   A     MSESELENOMETHIONINE I - 140
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE Q - 168
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE V - 169
1nw3_A_1681nw3   A     ACTACETATE ION Y - 183
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE V - 185
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE E - 186

Clusters included in this Subclass
CLUSTER: HE.5.152