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Information on SUBCLASS 5.40.1
Subclass Accession number: 8618
Subclass: 5.40.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 23.3 +/- 24.8
Average RMSD (Å) : 0.333 +/- 0.153

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XpchpphXh
(φψ)-conformation: aalpplpbb
Pattern: [ASV]xx[L][AG][ENQ][FY][FI][ERS][DGS][KQ][GN][IL][EKS][DS][IL][KV][IV][FVW][ST]
Conservation:-1.147-1.445-1.7431.4380.007-0.1532.0840.007-0.948-0.7490.6200.7990.582-0.5500.5850.582-0.8061.010-0.6500.479
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bif_*_2751bif   -281300SKHLAQFISDQNIKDLKVFTHHHHHHHHHHHT-TT-EEEEaaaaaaaaaaalxxlxbbbb
1dku_A_1531dku   A153172VPILGEYFEGKNLEDIVIVSHHHHHHHHHTTT--SEEEEEaaaaaaaaaaavxbvxbxbx
1fbt_A_271fbt   A3352AYALANFIRSQGISSLKVWTHHHHHHHHHTT--TT-EEEEaaaaaaaaaaalxxlxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bif_*_2751bif   *     GOLGLYCEROL F - 299
1fbt_A_271fbt   A     MSESELENOMETHIONINE T - 52
1fbt_A_271fbt   A     MSESELENOMETHIONINE S - 53

Clusters included in this Subclass
CLUSTER: HE.6.236