Logo
Information on SUBCLASS 6.1.1
Subclass Accession number: 8632
Subclass: 6.1.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 26

Average sequence ID (%) : 16.1 +/- 17.6
Average RMSD (Å) : 0.862 +/- 0.248

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXcXXXpphX
(φψ)-conformation: aagppaaabb
Pattern: xx[ailmptv][acilmvy][dehknqrsty]xx[dgnr][aikv]xx[DEKQRST][degkqrs][aciltv]x[fgilptv]xx
Conservation:-1.249-0.433-0.4940.2010.062-0.675-0.6352.1240.557-0.791-0.9751.8450.0211.084-0.9990.357-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a5c_A_2051a5c   A220235FKALQENGVLLEGALL..HHHHHHHT--GGG-EE..aaaaaaavxxaaabbb..
1ado_A_1981ado   A213228YKALSDHHIYLEGTLL..HHHHHHTT--GGG-EE..aaaaaaavxxaaabbb..
1aj0_*_1571aj0   -169185IARCEQAGIAKEKLLLD.HHHHHHTT--GGGEEEE.aaaaaaagxpaaaxbbb.
1bd3_A_1711bd3   A177194IEVLLRLGVKEERIIFVNHHHHHHTT--GGGEEEEEaaaaaaagxxaaabbxxb
1dpt_A_181dpt   A2441AAAASILGKPADRVNVTVHHHHHHH-S-GGG-EEEEaaaaaaavbwaaabbbbb
1f05_A_1151f05   A126143IELYKEAGISKDRILIKLHHHHHHTT--GGGEEEEEaaaaaaavxxaaabbxxb
1f2j_A_2081f2j   A223238VSALHRHGVVWEGCLL..HHHHHHHT--GGG-EE..aaaaaaagxxaaabbb..
1fba_A_1981fba   A213228YKALSDHHVYLEGTLL..HHHHHHTT--GGG-EE..aaaaaaalxxaaabbb..
1gd0_A_181gd0   A2441QQLAQATGKPPQYIAVHVHHHHHHH---GGG-EEEEaaaaaaavxxaaaxbbbb
1gd0_A_691gd0   A8198GLLAERLRISPDRVYINYHHHHHHH---GGGEEEEEaaaaaaavbxaaabbbxb
1gyx_A_141gyx   A2643DVIIRHLNSKDSSISIALHHHHHHHT--GGG-EEEEaaaaaaalbbaaabbbbb
1hzp_A_2091hzp   A225242RRAMDAAGVRPDQIDVFVHHHHHHTT--GGG--EEEaaaaaaavbxaaaxabbb
1i7p_A_2841i7p   A284299LPNLERVGHPKERCFT..HHHHHHHT--GGGEEE..aaaaaaagxxaaabbb..
1j5w_A_881j5w   A93110LESLEYLGINLKEHDIRFHHHHHHTT--TTTS-EEEaaaaaaavbxaaabxbbx
1lc5_A_131lc5   A1328REPATVLGISPDQLLD..HHHHHHHTS-GGGSEE..aaaaaaavbxaaaxbx..
1mfi_A_181mfi   A2441QQLAQATGKPAQYIAVHVHHHHHHH---GGG-EEEEaaaaaaavxwaaabbbbb
1mfi_A_691mfi   A8198GLLSDRLHISPDRVYINYHHHHHHH---GGGEEEEEaaaaaaavxxaaabbbxb
1o98_A_2161o98   A220237IEDSYKHGIYDEFVLPSVHHHHHHTT--GGG---EEaaaaaaavbxaaapxwbb
1ofg_A_671ofg   A7185KIVAAEYGVDPRKIY...HHHHHHHT--GGGEE...aaaaaaavxxaaaxb...
1onr_A_1051onr   A116133IKLYNDAGISNDRILIKLHHHHHHTT--GGGEEEEEaaaaaaavxxaaabbxxb
1otf_A_141otf   A2643EAMANSLDAPLERVRVLIHHHHHHHT--GGG-EEEEaaaaaaalbpaaaxbbbx
1p4k_A_2281p4k   A240257VKIVNRRGKNLKDIQVGFHHHHHHTT--GGG--EEEaaaaaaavbxaaabbbbb
1req_A_1711req   A179196VVTAEEQGVKPEQLAGTIHHHHHHTT--GGG-EEEEaaaaaaavbxaaaxbebb
2pth_*_712pth   -7592AAMASFFRINPDEILVAHHHHHHHHT--GGGEEEEEaaaaaaalbxaaabbbxb
2tmg_A_1872tmg   A197214GLAMDVLGIDPKKATVAVHHHHHHTT--TTT-EEEEaaaaaaavxxaaaxbbbb
4otc_A_134otc   A2542EAISRSLDAPLTSVRVIIHHHHHHHT--GGG-EEEEaaaaaaalbpaaaxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aj0_*_1571aj0   *     PH22-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE D - 185
1bd3_A_1711bd3   A     PO4PHOSPHATE ION G - 171
1bd3_A_1711bd3   A     PO4PHOSPHATE ION S - 172
1bd3_A_1711bd3   A     PO4PHOSPHATE ION V - 173
1gd0_A_181gd0   A     CITCITRIC ACID H - 40
1gd0_A_181gd0   A     CITCITRIC ACID V - 42
1gd0_A_691gd0   A     CITCITRIC ACID N - 97
1gd0_A_691gd0   A     CITCITRIC ACID Y - 99
1gyx_A_141gyx   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID S - 34
1gyx_A_141gyx   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID S - 38
1hzp_A_2091hzp   A     DAOLAURIC ACID G - 209
1hzp_A_2091hzp   A     DAOLAURIC ACID P - 210
1hzp_A_2091hzp   A     DAOLAURIC ACID V - 212
1hzp_A_2091hzp   A     DAOLAURIC ACID F - 213
1hzp_A_2091hzp   A     GOLGLYCEROL D - 222
1hzp_A_2091hzp   A     GOLGLYCEROL R - 225
1hzp_A_2091hzp   A     GOLGLYCEROL R - 226
1hzp_A_2091hzp   A     GOLGLYCEROL D - 229
1j5w_A_881j5w   A     MSESELENOMETHIONINE Y - 98
1j5w_A_881j5w   A     MSESELENOMETHIONINE L - 99
1mfi_A_181mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE K - 32
1mfi_A_181mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE Y - 36
1mfi_A_181mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE I - 37
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE Y - 95
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE I - 96
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE N - 97
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE Y - 99
1ofg_A_671ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 69
1req_A_1711req   A     DCADESULFO-COENZYME A G - 194
1req_A_1711req   A     DCADESULFO-COENZYME A T - 195
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gyx_A_141gyx   A AC1EPE BINDING SITE FOR CHAIN BS - 38

Clusters included in this Subclass
CLUSTER: HE.6.15
CLUSTER: HE.7.1
CLUSTER: HE.8.1
CLUSTER: HE.9.7