Information on SUBCLASS 6.12.1 |
Subclass Accession number: 8655
Subclass: 6.12.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.3 +/- 14.3 Average RMSD (Å) : 0.667 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXXhXXpXXh |
(φψ)-conformation: | aagppaapbb |
Pattern: | x | x | [ER] | x | [AL] | [ACV] | [KLM] | [AKN] | x | [GQ] | [ILV] | [PR] | x | [DES] | [AT] | [PTV] | [AFV] | x |
Conservation: | -1.709 | -0.280 | 1.491 | -1.281 | 0.204 | 0.149 | -0.280 | -0.709 | -0.852 | 0.847 | 1.436 | 1.382 | -0.709 | 0.721 | 1.004 | -0.566 | -0.852 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afw_A_100 | 1afw | A | 102 | 119 | EHRAACLASGIPYSTPFV | HHHHHHHHTT--TTS-EE | aaaaaaaaagxwaaxxbb |
1hzp_A_248 | 1hzp | A | 250 | 266 | INELLVKNLQLRPDAVV. | HHHHHHHHTT--TT-EE. | aaaaaaaaavxxaaxxb. |
1m3k_A_66 | 1m3k | A | 66 | 83 | PARQAAMKAGVPQEATAW | HHHHHHHHTT--TTSEEE | aaaaaaaaavxxaaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1afw_A_100 | 1afw | A | MPD2-METHYL-2,4-PENTANEDIOL | T - 101 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | S - 248 |
1hzp_A_248 | 1hzp | A | DAOLAURIC ACID | R - 249 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | R - 249 |
1hzp_A_248 | 1hzp | A | DAOLAURIC ACID | I - 250 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | E - 252 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | V - 255 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | K - 256 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | Q - 259 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | L - 260 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | R - 261 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | P - 262 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | D - 263 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | V - 265 |
Clusters included in this Subclass |
CLUSTER: HE.7.60 |