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Information on SUBCLASS 0.1.8
Subclass Accession number: 866
Subclass: 0.1.8 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 6.1 +/- 12.6
Average RMSD (Å) : 0.388 +/- 0.150

Consensus geometry
d (Å): 3 delta (°): 0-45 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXXX
(φψ)-conformation: bpaa
Pattern: xxx[adenst]xx
Conservation:0.508-0.651-0.5881.832-0.473-0.627
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amf_*_1661amf   -169174VYGSDAEEHHHHbxaaaa
1dl2_A_2031dl2   A203208SSTAEFEEHHHHxxaaaa
1ed8_A_4311ed8   A433438TDQTDLEEHHHHbbaaaa
1f46_A_231f46   A2328LNGELLEEHHHHxxaaaa
1fbl_*_4131fbl   -413418KMIAEEEEHHHHbxaaaa
1fo8_A_2711fo8   A273278LLAELWEEHHHHbxaaaa
1fxj_A_331fxj   A3338KAMVQHEEHHHHbpaaaa
1g8t_A_1111g8t   A114119QKSDLNEEHHHHbpaaaa
1h2c_A_1541h2c   A157162FLQEFVEEHHHHbxaaaa
1h6u_A_421h6u   A4247TAINVIEEHHHHbpaaaa
1ixh_*_1901ixh   -194199VEYAYAEEHHHHbxaaaa
1j5w_A_1551j5w   A159164YGLERIEEHHHHbxaaaa
1mqi_A_1881mqi   A192197LESTMNEEHHHHbxaaaa
1n9e_A_3951n9e   A396401YSDISYEEHHHHxbaaaa
1nxc_A_3471nxc   A347352SILAEFEEHHHHxxaaaa
2trc_P_1662trc   P170175IRASNTEEHHHHbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1amf_*_1661amf   *     MOOMOLYBDATE ION Y - 170
1g8t_A_1111g8t   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED I - 111
1g8t_A_1111g8t   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED Q - 114
1g8t_A_1111g8t   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED L - 118
1g8t_A_1111g8t   A     SULSULFATE ANION N - 119
1g8t_A_1111g8t   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED N - 119
1ixh_*_1901ixh   *     PO4PHOSPHATE ION Y - 193
1ixh_*_1901ixh   *     PO4PHOSPHATE ION E - 195
1j5w_A_1551j5w   A     MSESELENOMETHIONINE L - 161
1j5w_A_1551j5w   A     MSESELENOMETHIONINE E - 162
1j5w_A_1551j5w   A     MSESELENOMETHIONINE R - 163
1j5w_A_1551j5w   A     MSESELENOMETHIONINE I - 164
1mqi_A_1881mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID Y - 190
1mqi_A_1881mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID L - 191
1mqi_A_1881mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID L - 192
1mqi_A_1881mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID E - 193
1mqi_A_1881mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID M - 196
1n9e_A_3951n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE Y - 396
2trc_P_1662trc   P     MSESELENOMETHIONINE K - 166
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1amf_*_1661amf   * MO4MOLYBDATE BINDING SITE.Y - 170

Clusters included in this Subclass
CLUSTER: EH.0.18