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Information on SUBCLASS 7.4.1
Subclass Accession number: 8690
Subclass: 7.4.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 39.0 +/- 30.4
Average RMSD (Å) : 0.500 +/- 0.370

Consensus geometry
d (Å): 23 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XpXpXXhhXpX
(φψ)-conformation: aapppbpppbb
Pattern: [gilm][ade]x[iltv]xx[aq]x[enqs][rw]x[pqt]x[aep][aflp][pq][ekrt][kl]x[il]
Conservation:-0.8180.653-0.9360.147-0.121-0.3541.0280.1780.2760.768-0.6720.371-1.1860.314-1.4312.136-0.2350.192-1.9261.616
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bkp_A_2281bkp   A228247IDNLKIQMEREQFEAPELWIHHHHHHHHHS------EEEEaaaaaaaaaxxbbxxxxbxb
1hvy_A_2621hvy   A262281IEPLKIQLQREPRPFPKLRIHHHHHHHHTS------EEEEaaaaaaaaaxxxbpxxbbbb
1hw3_A_2621hw3   A262281IEPLKIQLQREPRPFPKLRIHHHHHHHTTS------EEEEaaaaaaaaaxxxbppxbbbb
1j3k_C_5571j3k   C557576IDSLKIQLNRIPYPFPTLKLHHHHHHHTTS------EEEEaaaaaaaaaxxpbpxxbbbb
1p8j_A_4311p8j   A432451GAMVALAQNWTTVAPQRKCIHHHHHHHHT-------EEEEaaaaaaaaaxxpxxpxbbbb
1qqq_A_2131qqq   A213232MDQTHLQLSREPRPLPKLIIHHHHHHHHTS------EEEEaaaaaaaaaxxxbpxxbxbb
1tsy_*_2651tsy   -265284LDQIKEQLSRTPRPAPTLQLHHHHHHHTTS------EEEEaaaaaaaaaxbpbpxxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1p8j_A_4311p8j   A     NAGN-ACETYL-D-GLUCOSAMINE A - 436
1p8j_A_4311p8j   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 439
1p8j_A_4311p8j   A     NAGN-ACETYL-D-GLUCOSAMINE N - 440
1p8j_A_4311p8j   A     FUCFUCOSE N - 440
1qqq_A_2131qqq   A     CXMN-CARBOXYMETHIONINE Q - 219
1qqq_A_2131qqq   A     CXMN-CARBOXYMETHIONINE P - 224
1qqq_A_2131qqq   A     CXMN-CARBOXYMETHIONINE R - 225
1qqq_A_2131qqq   A     CXMN-CARBOXYMETHIONINE L - 227

Clusters included in this Subclass
CLUSTER: HE.7.68
CLUSTER: HE.8.13