Information on SUBCLASS 8.9.1 |
Subclass Accession number: 8722
Subclass: 8.9.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 28.5 +/- 32.6 Average RMSD (Å) : 1.200 +/- 0.606 Consensus geometry
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Consensus Sequence: | ppphpXXXhhXX |
(φψ)-conformation: | aabaappbppbb |
Pattern: | [CQ] | [hl] | [LV] | [n] | [ACL] | [KL] | [HR] | [IMV] | [AIL] | [ANT] | [LM] | [SY] | [KNQ] | [er] | [IY] | [KRT] | [EKQ] | [DENR] | [AP] | [KNQY] | [AKM] | x | [fpv] | [LV] | [GP] | [r] | [ITV] | [FLV] | [ILMT] | [FI] | [GV] |
Conservation: | 0.094 | -1.604 | 0.859 | -0.118 | -0.122 | -0.356 | 2.151 | 0.809 | -0.350 | -0.441 | 1.493 | 0.732 | 0.266 | -1.411 | 0.336 | -0.023 | 0.775 | -0.236 | 1.178 | -0.783 | -0.802 | -2.121 | -2.182 | 0.859 | 0.978 | -0.522 | 0.091 | -0.198 | -0.358 | 1.125 | -0.118 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c8k_A_576 | 1c8k | A | 576 | 606 | QLLNCLHVITLYNRIKKEPNKFVVPRTVMIG | HHHHHHHHHHHHHHHHHSTTS----EEEEEE | aaaaaaaaaaaaaaaaabaabxbxxbbxbbb |
1l5r_A_576 | 1l5r | A | 576 | 606 | QLLNCLHVITMYNRIKKDPKKLFVPRTVIIG | HHHHHHHHHHHHHHHHHSTTS----EEEEEE | aaaaaaaaaaaaaaaaabaaxxbxxbbxbbb |
1l5w_A_541 | 1l5w | A | 541 | 571 | QHLNLLHILALYKEIRENPQADRVPRVFLFG | HHHHHHHHHHHHHHHHT-TT-----EEEEEE | aaaaaaaaaaaaaaaaabaapxbxpbbxbbb |
1ryp_A_114 | 1ryp | A | 114 | 144 | CDVLAKRMANLSQIYTQRAYMRPLGVILTFV | HHHHHHHHHHHHHHHHH-TTS---S-EEEEE | aaaaaaaaaaaaaaaaaxaaxxxxxbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | I - 127 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | Y - 128 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | T - 129 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | Q - 130 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | R - 131 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | A - 132 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | Y - 133 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | M - 134 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | R - 135 |
1ryp_A_114 | 1ryp | A | MGMAGNESIUM ION | P - 136 |
Clusters included in this Subclass |
CLUSTER: HE.8.42 |