Information on SUBCLASS 8.12.1 |
Subclass Accession number: 8725
Subclass: 8.12.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 18.3 +/- 16.2 Average RMSD (Å) : 0.933 +/- 0.306 Consensus geometry
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Consensus Sequence: | ppXpXXXppLhh |
(φψ)-conformation: | aapappaaapbb |
Pattern: | [EQ] | [AGP] | [ILV] | [GVY] | [DKS] | [ALV] | [LY] | [EK] | [NR] | [ACS] | [DS] | [KV] | [NP] | x | [EKS] | [DEK] | [L] | [AFL] | [ILP] | [NT] |
Conservation: | 1.489 | -0.760 | 0.575 | -1.582 | -0.555 | -0.658 | 0.038 | 1.045 | 0.985 | -0.144 | 0.896 | -0.626 | 0.670 | -1.582 | -0.247 | 0.164 | 1.808 | -1.069 | -1.171 | 0.724 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mzr_A_55 | 1mzr | A | 56 | 75 | EGVGKALKNASVNREELFIT | HHHHHHHHHS-S-GGG-EEE | aaaaaaaaaxapxaaaxbbb |
1onw_A_210 | 1onw | A | 210 | 229 | QPIYDLLENCDVPISKLLPT | HHHHHHHHT----GGGEEEE | aaaaaaaaabaxxaaaxbwb |
1req_B_172 | 1req | B | 177 | 196 | EALVSVYERSDKPAKDLALN | HHHHHHHHTSSS-GGG--EE | aaaaaaaaaxabpaaaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1onw_A_210 | 1onw | A | KCXLYSINE NZ-CARBOXYLIC ACID | T - 229 |
1onw_A_210 | 1onw | A | ZNZINC ION | T - 229 |
Clusters included in this Subclass |
CLUSTER: HE.9.41 |