Information on SUBCLASS 10.5.1 |
Subclass Accession number: 8748
Subclass: 10.5.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 74.7 +/- -34.1 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
|
Consensus Sequence: | GphXpCcPKpXpYp |
(φψ)-conformation: | aapaabbaaappbb |
Pattern: | [A] | [T] | [D] | [R] | [C] | [C] | [F] | [V] | [H] | [D] | [C] | [C] | [Y] | [G] | [KNT] | [LV] | [NPT] | [DS] | [C] | [KN] | [P] | [K] | [ST] | [AD] | [RT] | [Y] | [KS] | [Y] | [KS] |
Conservation: | -0.446 | -0.064 | 0.318 | -0.064 | 1.464 | 1.464 | 0.318 | -0.446 | 1.082 | 0.318 | 1.464 | 1.464 | 0.700 | 0.318 | -1.380 | -1.012 | -1.465 | -0.957 | 1.464 | -0.884 | 0.700 | -0.064 | -0.895 | -1.343 | -1.196 | 0.700 | -1.126 | 0.700 | -1.126 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fv0_A_40 | 1fv0 | A | 40 | 68 | ATDRCCFVHDCCYGNLPDCNPKSDRYKYK | HHHHHHHHHHHHHHT-TTS-TTT----EE | aaaaaaaaaaaaaaaaaabbaaaxxbbbb |
1gmz_A_39 | 1gmz | A | 39 | 67 | ATDRCCFVHDCCYGKLTSCKPKTDRYSYS | HHHHHHHHHHHHHHT-TTS-TTT----EE | aaaaaaaaaaaaaaabaabbaaaxxxbbb |
1oqs_A_40 | 1oqs | A | 40 | 68 | ATDRCCFVHDCCYGTVNDCNPKTATYSYS | HHHHHHHHHHHHHHT--SS-TTT----EE | aaaaaaaaaaaaaaaxaabxaaaxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fv0_A_40 | 1fv0 | A | 9AR9-HYDROXY ARISTOLOCHIC ACID | C - 44 |
1fv0_A_40 | 1fv0 | A | 9AR9-HYDROXY ARISTOLOCHIC ACID | C - 45 |
1fv0_A_40 | 1fv0 | A | 9AR9-HYDROXY ARISTOLOCHIC ACID | F - 46 |
1fv0_A_40 | 1fv0 | A | 9AR9-HYDROXY ARISTOLOCHIC ACID | H - 48 |
1fv0_A_40 | 1fv0 | A | 9AR9-HYDROXY ARISTOLOCHIC ACID | D - 49 |
1fv0_A_40 | 1fv0 | A | 9AR9-HYDROXY ARISTOLOCHIC ACID | Y - 52 |
1gmz_A_39 | 1gmz | A | IOH2-PROPANOL, ISOPROPANOL | C - 44 |
1gmz_A_39 | 1gmz | A | IOH2-PROPANOL, ISOPROPANOL | H - 47 |
Clusters included in this Subclass |
CLUSTER: HE.12.12 |