Information on SUBCLASS 11.4.1 |
Subclass Accession number: 8755
Subclass: 11.4.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 19.8 +/- 17.2 Average RMSD (Å) : 0.600 +/- 0.200 Consensus geometry
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Consensus Sequence: | XhGhKhhpXphhhhh |
(φψ)-conformation: | aalppbpppabeabb |
Pattern: | [ERS] | [EMY] | x | x | [EMQ] | [ART] | [FLY] | [GKR] | [EKR] | [R] | [HKR] | [DKN] | [FHL] | [FLV] | [LTV] | [EN] | [GR] | [L] | [EKT] | [AKV] | [LMV] | [G] | [ILV] | [K] | [ACF] | [LV] | [EKR] | [NP] | [ENS] | [AG] | [AG] | [FL] | [FY] | [CLV] | [FLW] | [FM] | [DK] |
Conservation: | -0.790 | -1.227 | -0.877 | -1.401 | -0.528 | -0.965 | -0.004 | -0.790 | -0.004 | 2.091 | -0.092 | -0.353 | -0.965 | -0.615 | -0.703 | 0.374 | -0.083 | 1.305 | -0.703 | -1.227 | -0.004 | 2.877 | 0.258 | 2.091 | -0.877 | 0.212 | -0.004 | 0.277 | -0.353 | 0.480 | 0.057 | 0.480 | 2.099 | -0.528 | -0.179 | 0.398 | 0.275 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5p_A_282 | 1b5p | A | 290 | 326 | EMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMD | HHHHHHHHHHHHHHHHHHHHHT--B---SBTTEEEEE | aaaaaaaaaaaaaaaaaaaaavxxbxxxabeabbxbx |
1iay_A_325 | 1iay | A | 333 | 369 | RESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMD | HHHHHHHHHHHHHHHHHHHHTT--B---SSSSEEEEE | aaaaaaaaaaaaaaaaaaaaavxxbxpbabeabbxxb |
1o4s_A_284 | 1o4s | A | 284 | 320 | SYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFK | HHHHHHHHHHHHHHHHHHHHTT------SBSSEEEEE | aaaaaaaaaaaaaaaaaaaaavxbbbxxabeabbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b5p_A_282 | 1b5p | A | PO4PHOSPHATE ION | F - 321 |
1b5p_A_282 | 1b5p | A | PO4PHOSPHATE ION | Y - 322 |
1b5p_A_282 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | Y - 322 |
1o4s_A_284 | 1o4s | A | PLPPYRIDOXAL-5'-PHOSPHATE | Y - 316 |
Clusters included in this Subclass |
CLUSTER: HE.11.21 |