ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 12.4.1

Subclass Accession number: 8764
Subclass: 12.4.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.7 (>50 %)  1.7.2 (>50 %)  1.7.2.3
GO : GO:0030151 (>50 %)  GO:0046914 (>50 %)
SCOP : 53705 (>75 %)  53706 (>75 %)  53707 (>75 %)

Number of loops: 3

Average sequence ID (%) : 81.7 +/- -49.9
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 90-135

rho (°): 90-135

Consensus Sequence:	RpDPXhNPLGTPpGLI
(φψ)-conformation:	aabaaabppabaalbp

Pattern:	[A]	[DS]	[F]	[R]	[EN]	[D]	[P]	[EL]	[FIL]	[N]	[P]	[L]	[G]	[T]	[P]	[ST]	[G]	[L]	[I]	[E]
Conservation:	-0.354	-1.139	0.755	0.201	-1.059	0.755	1.310	-2.166	-1.463	0.755	1.310	-0.354	0.755	0.201	1.310	-1.062	0.755	-0.354	-0.354	0.201

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1dmr_*_582	1dmr	-	582	601	ASFREDPLLNPLGTPTGLIE	HHHHH-TTTS--SSTTSSEE	aaaaabaaabxxabaavbxx
1eu1_A_582	1eu1	A	582	601	ADFREDPLFNPLGTPSGLIE	HHHHH-TTTS--SSTTSSEE	aaaaabaaabxxabaavbxx
1tmo_*_588	1tmo	-	588	607	ADFRNDPEINPLGTPSGLIE	HHHHH-TTTS--SSSSSSEE	aaaaabaaabxxaxaavbxb

Clusters included in this Subclass

CLUSTER: HE.12.8