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Information on SUBCLASS 0.1.20
Subclass Accession number: 878
Subclass: 0.1.20 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 17.0 +/- 17.0
Average RMSD (Å) : 0.488 +/- 0.125

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hXXX
(φψ)-conformation: bbea
Pattern: [AIMV][AGKLM]x[CGS]x[egst][AG]xxx[almy][efkmr]
Conservation:1.677-0.348-0.7531.091-0.462-0.0941.866-0.724-0.870-0.8060.215-0.791
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gpj_A_741gpj   A7586VKRGSEAVRHLFEEEHHHHHHHHHbbbeaaaaaaaa
1j1i_A_1081j1i   A111122VGNSMGGATGLGEEEHHHHHHHHHbbbeaaaaaaaa
1k2x_A_1211k2x   A121132MMIGEGAENFAFEEEHHHHHHHHHbbbeaaaaaaaa
1qvc_A_531qvc   A5869VLFGKLAEVASEEEETHHHHHHHHbbbeaaaaaaaa
1r1d_A_871r1d   A90101AGLSLGGVFSLKEE-THHHHHHHHbbbeaaaaaaaa
1su8_A_2881su8   A291302VGICCTGNEVLMEEEHHHHHHHHHbbbeaaaaaaaa
1su8_A_4701su8   A472483VATGCGAGALMREEEHHHHHHHHHbbbeaaaaaaaa
1tht_A_1081tht   A111122IAASLSARVAYEEEETHHHHHHHHbbbeaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpj_A_741gpj   A     GLUGLUTAMIC ACID V - 88
1r1d_A_871r1d   A     MSESELENOMETHIONINE A - 90
1r1d_A_871r1d   A     MSESELENOMETHIONINE G - 91
1r1d_A_871r1d   A     MSESELENOMETHIONINE L - 92
1r1d_A_871r1d   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID L - 92
1r1d_A_871r1d   A     MSESELENOMETHIONINE S - 93
1r1d_A_871r1d   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID S - 93
1r1d_A_871r1d   A     MSESELENOMETHIONINE L - 94
1r1d_A_871r1d   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID L - 94
1r1d_A_871r1d   A     MSESELENOMETHIONINE G - 96
1r1d_A_871r1d   A     MSESELENOMETHIONINE V - 97
1r1d_A_871r1d   A     MSESELENOMETHIONINE L - 100
1r1d_A_871r1d   A     MSESELENOMETHIONINE L - 102
1su8_A_2881su8   A     NFSFE(4)-NI(1)-S(5) CLUSTER C - 294
1su8_A_2881su8   A     NFSFE(4)-NI(1)-S(5) CLUSTER C - 295
1su8_A_2881su8   A     NFSFE(4)-NI(1)-S(5) CLUSTER N - 298
1su8_A_4701su8   A     NFSFE(4)-NI(1)-S(5) CLUSTER T - 474
1su8_A_4701su8   A     NFSFE(4)-NI(1)-S(5) CLUSTER G - 475
1su8_A_4701su8   A     NFSFE(4)-NI(1)-S(5) CLUSTER C - 476
1su8_A_4701su8   A     NFSFE(4)-NI(1)-S(5) CLUSTER G - 477

Clusters included in this Subclass
CLUSTER: EH.0.33
CLUSTER: EH.1.44