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Information on SUBCLASS 1.1.3
Subclass Accession number: 8785
Subclass: 1.1.3 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 36

Average sequence ID (%) : 12.5 +/- 15.6
Average RMSD (Å) : 0.514 +/- 0.178

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXXXX
(φψ)-conformation: aapaa
Pattern: xxxx[ADEGKNQST]x[dekpr][deknqrstwy][cfgilmvy][adekqrs]
Conservation:-0.5400.535-0.939-0.6591.073-0.7232.236-0.579-0.285-0.118
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a6j_A_1211a6j   A128137AKRLADKTICHHHHT-HHHHaaaaaxaaaa
1aqw_A_1741aqw   A181190GRLSARPKLKHHHHTSHHHHaaaaapaaaa
1b4p_A_1781b4p   A185194ARFEGLKKISHHHHTSHHHHaaaaaxaaaa
1b8x_A_1751b8x   A180189KRIEAIPQIDHHHHTSHHHHaaaaabaaaa
1c3c_A_3891c3c   A391400EYLLEDEEVKHHHHT-HHHHaaaaaxaaaa
1eem_A_1971eem   A204213AAMKEDPTVSHHHHT-HHHHaaaaaxaaaa
1ezv_H_771ezv   H8392EHFKNTEEGKHHHHTSHHHHaaaaaxaaaa
1f0l_A_1141f0l   A115124MEQVGTEEFIHHHHTSHHHHaaaaaxaaaa
1f3a_A_1781f3a   A185194SRISSLPNVKHHHHTSHHHHaaaaapaaaa
1gnw_A_1921gnw   A199208AEITKRPASEHHHHSSHHHHaaaaaxaaaa
1gum_A_1791gum   A186195VKLSNIPTIKHHHHHSHHHHaaaaapaaaa
1hna_*_1781hna   -185194SRFEGLEKISHHHHTSHHHHaaaaaxaaaa
1inp_*_41inp   -2029RACRQQETLFHHHHHSHHHHaaaaaxaaaa
1iyh_A_1721iyh   A179188KKVQAIPAVAHHHHHSHHHHaaaaaxaaaa
1jqo_A_5741jqo   A579588ERLFSVDWYMHHHHT-HHHHaaaaaxaaaa
1k28_A_3041k28   A309318KAGRDSLWYQHHHHSSHHHHaaaaabaaaa
1k3y_A_1791k3y   A186195TRISNLPTVKHHHHHSHHHHaaaaapaaaa
1kho_A_1141kho   A128137FGDADTPYHAHHHHTSHHHHaaaaaxaaaa
1kiy_A_291kiy   A4453AHHFAQPRQQHHHHTSHHHHaaaaaxaaaa
1l0l_H_161l0l   H2231EQCEQLEKCVHHHHTSHHHHaaaaaxaaaa
1lc0_A_181lc0   A2433LRDLKDPRSAHHHHTSHHHHaaaaaxaaaa
1lm6_A_401lm6   A5362LKHSQDPVMAHHHHT-HHHHaaaaaxaaaa
1m0u_A_2221m0u   A229238DAVNALEPIKHHHHTSHHHHaaaaaxaaaa
1mlw_A_2781mlw   A278287VPLLAEPSFAHHHHTSHHHHaaaaaxaaaa
1n2a_A_1761n2a   A183192QRMAERPEVQHHHHTSHHHHaaaaaxaaaa
1n45_A_221n45   A2635TQAENAEFMRHHHHHSHHHHaaaaaxaaaa
1omw_A_551omw   A5665EKIFSQKLGYHHHHTSHHHHaaaaabaaaa
1p1j_A_3551p1j   A357366GYNLSAPKQFHHHHTSHHHHaaaaaxaaaa
1q16_A_1311q16   A136145ASIIEDADKAHHHHT-HHHHaaaaabaaaa
1qgu_B_351qgu   B4251FAWTTTAEYEHHHHTSHHHHaaaaaxaaaa
1udg_*_331udg   -3746EPELANPLTAHHHHTSHHHHaaaaapaaaa
1wht_B_2711wht   B276285TAYYNRRDVQHHHHT-HHHHaaaaaxaaaa
2fhe_A_1732fhe   A180189SRIEALPSIKHHHHTSHHHHaaaaaxaaaa
2gsq_*_1752gsq   -182191KRVAECPKIAHHHHTSHHHHaaaaaxaaaa
2ts1_*_1452ts1   -146155NYMMAKESVQHHHHTSHHHHaaaaaxaaaa
8dfr_*_938dfr   -97106LALLDSPELKHHHHHSHHHHaaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aqw_A_1741aqw   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID K - 188
1aqw_A_1741aqw   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID F - 192
1b4p_A_1781b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE K - 192
1b4p_A_1781b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE Y - 196
1kho_A_1141kho   A     ZNZINC ION H - 126
1kho_A_1141kho   A     ZNZINC ION Y - 127
1kho_A_1141kho   A     ZNZINC ION G - 129
1kho_A_1141kho   A     ZNZINC ION D - 130
1kho_A_1141kho   A     ZNZINC ION T - 133
1kho_A_1141kho   A     ZNZINC ION Y - 135
1kho_A_1141kho   A     ZNZINC ION H - 136
1kiy_A_291kiy   A     EDO1,2-ETHANEDIOL L - 55
1lc0_A_181lc0   A     PO4PHOSPHATE ION R - 18
1lc0_A_181lc0   A     PO4PHOSPHATE ION A - 19
1n45_A_221n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 25
1n45_A_221n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 28
1n45_A_221n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 29
1n45_A_221n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 30
1n45_A_221n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 34
1n45_A_221n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 35
1n45_A_221n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 38
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 355
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 356
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL D - 356
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 359
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 360
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL L - 360
1p1j_A_3551p1j   A     PO4PHOSPHATE ION K - 369
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE K - 369
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL K - 369
1p1j_A_3551p1j   A     PO4PHOSPHATE ION K - 373
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL K - 373
1qgu_B_351qgu   B     MO6MAGNESIUM ION, 6 WATERS COORDINATED V - 38
1qgu_B_351qgu   B     EDO1,2-ETHANEDIOL E - 51
1qgu_B_351qgu   B     EDO1,2-ETHANEDIOL A - 52
1qgu_B_351qgu   B     EDO1,2-ETHANEDIOL N - 54
1wht_B_2711wht   B     BZSL-BENZYLSUCCINIC ACID E - 272
1wht_B_2711wht   B     NAGN-ACETYL-D-GLUCOSAMINE Y - 279
1wht_B_2711wht   B     NAGN-ACETYL-D-GLUCOSAMINE N - 280
1wht_B_2711wht   B     NAGN-ACETYL-D-GLUCOSAMINE R - 282
1wht_B_2711wht   B     NAGN-ACETYL-D-GLUCOSAMINE Q - 285
8dfr_*_938dfr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 93

Clusters included in this Subclass
CLUSTER: HH.1.9
CLUSTER: HH.2.13