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Information on SUBCLASS 1.1.8
Subclass Accession number: 8790
Subclass: 1.1.8 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 13.9 +/- 16.8
Average RMSD (Å) : 0.475 +/- 0.148

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXpXX
(φψ)-conformation: aapaa
Pattern: xxxx[dehnqrstw][dekpr]xxx
Conservation:-0.392-0.062-0.747-0.7570.0022.445-0.6710.456-0.274
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ab4_*_4681ab4   -490498RILGSADRLHHHH-HHHHaaaaxaaaa
1ajs_A_3011ajs   A308316RTLSDPELFHHHHSHHHHaaaabaaaa
1bs0_A_2491bs0   A255263LLQFARHLIHHHH-HHHHaaaaxaaaa
1cza_N_4811cza   N496504ELGLRKQTHHHHHSHHHHaaaaxaaaa
1d3y_A_3031d3y   A312320GLKNDDFVRHHHH-HHHHaaaaxaaaa
1dpg_A_1881dpg   A191199LRFGNPIFDHHHT-HHHHaaaabaaaa
1ea5_A_2011ea5   A208216MHILSPGSRHHHH-HHHHaaaaxaaaa
1ezv_F_51ezv   F1422YILKSPVLSHHHHSHHHHaaaaxaaaa
1gee_A_1971gee   A198206EKFADPEQRHHHHSHHHHaaaaxaaaa
1hyo_A_951hyo   A95103RLRDDKELRHHHH-HHHHaaaaxaaaa
1inp_*_41inp   -2129ACRQQETLFHHHHSHHHHaaaaxaaaa
1j7n_A_2101j7n   A222230AYYIEPQHRHHHHSHHHHaaaaxaaaa
1jdr_A_2331jdr   A237245SLIQDPKYLHHHHSHHHHaaaaxaaaa
1ji2_A_4811ji2   A493501LRHRLASLTHHHH-HHHHaaaabaaaa
1jqn_A_7471jqn   A753761MCRDWPFFSHHHH-HHHHaaaabaaaa
1jqo_A_8081jqo   A815823MYNEWPFFRHHHH-HHHHaaaabaaaa
1n5m_A_2041n5m   A211219MHILSLPSRHHHHSHHHHaaaabaaaa
1yaa_A_3001yaa   A308316KLLETPELTHHHHSHHHHaaaabaaaa
5rub_A_4235rub   A426434YAREHKELAHHHT-HHHHaaaabaaaa
7aat_A_3007aat   A308316LILNTPELRHHHH-HHHHaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gee_A_1971gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 200
1jdr_A_2331jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 234
1jdr_A_2331jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 235
1jqn_A_7471jqn   A     ASPASPARTIC ACID M - 769
1jqn_A_7471jqn   A     ASPASPARTIC ACID K - 773

Clusters included in this Subclass
CLUSTER: HH.0.18
CLUSTER: HH.0.21
CLUSTER: HH.1.34
CLUSTER: HH.2.36