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Information on SUBCLASS 1.1.12
Subclass Accession number: 8794
Subclass: 1.1.12 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 41.7 +/- 25.3
Average RMSD (Å) : 0.300 +/- 0.126

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXpPF
(φψ)-conformation: aapaa
Pattern: [AEKQ][ADES][hlv][AL][AEKS][EGKQS][FH][Y][aq][de][HL][EKRS][ADEGR][KR][P][F][FY][gp][ADGS][L][ILV][EKNQRS][FY]
Conservation:-0.551-0.578-1.138-0.543-0.646-0.7940.7862.080-0.875-0.500-0.543-0.411-1.1160.4192.0801.6031.064-0.695-0.6870.6490.065-0.6761.007
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ehw_A_451ehw   A4567ESVLAEHYQDLRRKPFYPALIRYHHHHHHHTGGGTTSTTHHHHHHHaaaaaaaaaaaaapaaaaaaaaa
1k44_A_431k44   A4365AELASQHYAEHEGKPFFGSLLEFHHHHHHHTGGGTTSTTHHHHHHHaaaaaaaaaaaaaxaaaaaaaaa
1nhk_L_441nhk   L4466QAQAEGFYAVHKARPFFKDLVQFHHHHHHHTGGGTTSTTHHHHHHHaaaaaaaaaaaaaxaaaaaaaaa
1npk_*_491npk   -4971KDLAESHYAEHKERPFFGGLVSFHHHHHHHTGGGTTSTTHHHHHHHaaaaaaaaaaaaaxaaaaaaaaa
1nsq_A_461nsq   A4668KELLEKHYADLSARPFFPGLVNYHHHHHHHTGGGTTSTTHHHHHHHaaaaaaaaaaaaaxaaaaaaaaa
1nue_A_451nue   A4567EEHLKQHYIDLKDRPFFPGLVKYHHHHHHHTGGGTTSTTHHHHHHHaaaaaaaaaaaaaxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nhk_L_441nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE Y - 51
1nhk_L_441nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE H - 54
1nhk_L_441nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE R - 57
1nhk_L_441nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE F - 59
1nhk_L_441nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE L - 63
1nhk_L_441nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE M - 67
1nsq_A_461nsq   A     PHSPHOSPHONO GROUP H - 52
1nsq_A_461nsq   A     PHSPHOSPHONO GROUP Y - 53
1nsq_A_461nsq   A     PHSPHOSPHONO GROUP M - 69
1nue_A_451nue   A     GDPGUANOSINE-5'-DIPHOSPHATE Y - 52
1nue_A_451nue   A     MGMAGNESIUM ION Y - 52
1nue_A_451nue   A     GDPGUANOSINE-5'-DIPHOSPHATE D - 54
1nue_A_451nue   A     MGMAGNESIUM ION D - 54
1nue_A_451nue   A     GDPGUANOSINE-5'-DIPHOSPHATE L - 55
1nue_A_451nue   A     MGMAGNESIUM ION L - 55
1nue_A_451nue   A     GDPGUANOSINE-5'-DIPHOSPHATE R - 58
1nue_A_451nue   A     GDPGUANOSINE-5'-DIPHOSPHATE F - 60
1nue_A_451nue   A     GDPGUANOSINE-5'-DIPHOSPHATE L - 64
1nue_A_451nue   A     GDPGUANOSINE-5'-DIPHOSPHATE Y - 67

Clusters included in this Subclass
CLUSTER: HH.8.7