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Information on SUBCLASS 1.1.25
Subclass Accession number: 8807
Subclass: 1.1.25 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 3.0 +/- 5.6
Average RMSD (Å) : 0.375 +/- 0.126

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: hXcpp
(φψ)-conformation: aapaa
Pattern: [LPY]xxxx[CDN][EHPT][EKQS]x[AGIL]x
Conservation:-0.041-1.446-0.023-0.226-0.4301.6720.2821.909-0.836-0.633-0.226
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dmt_A_1301dmt   A139149YRSCINESAIDHHHHH-HHHHHaaaaaxaaaaa
1ezf_A_1951ezf   A195205PLVGEDTERANHHHHH-HHHHHaaaaaxaaaaa
1i1q_A_3421i1q   A350360LDMRTDHKELSHHHHH-HHHHHaaaaaxaaaaa
1kf6_B_1531kf6   B153163LCYAACPQFGLHHHHH-HHHHHaaaaaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dmt_A_1301dmt   A     NAGN-ACETYL-D-GLUCOSAMINE R - 140
1dmt_A_1301dmt   A     NAGN-ACETYL-D-GLUCOSAMINE N - 144
1dmt_A_1301dmt   A     NAGN-ACETYL-D-GLUCOSAMINE S - 146
1dmt_A_1301dmt   A     NAGN-ACETYL-D-GLUCOSAMINE A - 147
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID A - 204
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID N - 205
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID M - 207
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID G - 208
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID L - 209
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID L - 211
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID Q - 212
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID N - 215
1ezf_A_1951ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID R - 218
1kf6_B_1531kf6   B     FS4IRON/SULFUR CLUSTER L - 153
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER C - 154
1kf6_B_1531kf6   B     FS4IRON/SULFUR CLUSTER C - 154
1kf6_B_1531kf6   B     FS4IRON/SULFUR CLUSTER Y - 155
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER A - 157
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER C - 158
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER P - 159
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER Q - 160
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER F - 161

Clusters included in this Subclass
CLUSTER: HH.2.58