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Information on SUBCLASS 1.1.29
Subclass Accession number: 8811
Subclass: 1.1.29 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 21.4 +/- 25.7
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 0-45 rho (°): 0-45
Consensus Sequence: XXpXX
(φψ)-conformation: aapaa
Pattern: [PR][EKR][KMY][L][KT][IP][EGK][EF][DT]x[FR][FKR]xx
Conservation:0.3880.793-0.6682.6200.5680.143-0.546-0.0830.740-1.277-0.309-0.790-0.546-1.033
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1lfk_A_951lfk   A100113RRKLTPGFTLRKMQHHHHGGGG-HHHHHaaaaaaaaxaaaaa
1nb0_A_1401nb0   A140153PEYLKIKEDNFFQVHHHHGGGG-HHHHHaaaaaaaaxaaaaa
1ued_A_1041ued   A109122RKMLTPEFTVRRIRHHHHGGGSSHHHHHaaaaaaaaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lfk_A_951lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 96
1lfk_A_951lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 100
1lfk_A_951lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 103
1lfk_A_951lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 107
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 105
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 109
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 112
1ued_A_1041ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 116

Clusters included in this Subclass
CLUSTER: HH.4.140