Information on SUBCLASS 1.1.29 |
Subclass Accession number: 8811
Subclass: 1.1.29 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 21.4 +/- 25.7 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | XXpXX |
(φψ)-conformation: | aapaa |
Pattern: | [PR] | [EKR] | [KMY] | [L] | [KT] | [IP] | [EGK] | [EF] | [DT] | x | [FR] | [FKR] | x | x |
Conservation: | 0.388 | 0.793 | -0.668 | 2.620 | 0.568 | 0.143 | -0.546 | -0.083 | 0.740 | -1.277 | -0.309 | -0.790 | -0.546 | -1.033 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lfk_A_95 | 1lfk | A | 100 | 113 | RRKLTPGFTLRKMQ | HHHHGGGG-HHHHH | aaaaaaaaxaaaaa |
1nb0_A_140 | 1nb0 | A | 140 | 153 | PEYLKIKEDNFFQV | HHHHGGGG-HHHHH | aaaaaaaaxaaaaa |
1ued_A_104 | 1ued | A | 109 | 122 | RKMLTPEFTVRRIR | HHHHGGGSSHHHHH | aaaaaaaaxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lfk_A_95 | 1lfk | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 96 |
1lfk_A_95 | 1lfk | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 100 |
1lfk_A_95 | 1lfk | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 103 |
1lfk_A_95 | 1lfk | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 107 |
1ued_A_104 | 1ued | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 105 |
1ued_A_104 | 1ued | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 109 |
1ued_A_104 | 1ued | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 112 |
1ued_A_104 | 1ued | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 116 |
Clusters included in this Subclass |
CLUSTER: HH.4.140 |