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Information on SUBCLASS 1.2.19
Subclass Accession number: 8841
Subclass: 1.2.19 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 2.8 +/- 5.7
Average RMSD (Å) : 0.500 +/- 0.173

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: pXpXX
(φψ)-conformation: aabaa
Pattern: [MPT]xx[ADQ]x[QR]x[DHR][KPR][EGK][LPY][ALV]
Conservation:-0.141-0.990-0.565-0.141-0.7072.679-0.7070.4260.7090.001-0.8490.284
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l9m_A_2021l9m   A204215TDVASRNDPKYVHHHHGGG-HHHHaaaaaaabaaaa
1ofg_A_1951ofg   A195206PAQQWRLRRELAHHHHTTS-HHHHaaaaaaaxaaaa
2kfn_A_4912kfn   A512523MWPDLQKHKGPLHHHHTTS-HHHHaaaaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l9m_A_2021l9m   A     CACALCIUM ION A - 221
1l9m_A_2021l9m   A     CACALCIUM ION M - 222
1ofg_A_1951ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 195
1ofg_A_1951ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 196
1ofg_A_1951ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 197
1ofg_A_1951ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 199
1ofg_A_1951ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 200
1ofg_A_1951ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 205
2kfn_A_4912kfn   A     ZNZINC ION Y - 497
2kfn_A_4912kfn   A     SSULFUR ATOM Y - 497
2kfn_A_4912kfn   A     ZNZINC ION A - 498
2kfn_A_4912kfn   A     ZNZINC ION D - 501
2kfn_A_4912kfn   A     MNMANGANESE (II) ION D - 501
2kfn_A_4912kfn   A     SSULFUR ATOM D - 501
2kfn_A_4912kfn   A     ZNZINC ION A - 502

Clusters included in this Subclass
CLUSTER: HH.5.124