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Information on SUBCLASS 1.2.33
Subclass Accession number: 8855
Subclass: 1.2.33 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 17.6 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXHPh
(φψ)-conformation: aabaa
Pattern: [PT][AS][DE][AS][H][P][IV][LV][AF][NR][HR][IV][AI][NR][AR][K][QR]
Conservation:-0.486-0.4860.214-0.4862.5942.0340.074-0.486-1.046-0.346-0.0660.074-1.046-0.346-0.9060.914-0.206
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_1771aa6   -177193PADSHPIVANHVINAKRHHHH-HHHHHHHHHHHHaaaabaaaaaaaaaaaa
2nap_A_1772nap   A177193TSEAHPVLFRRIARRKQHHHHSHHHHHHHHHHHHaaaabaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_1771aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE P - 177
1aa6_*_1771aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 179
1aa6_*_1771aa6   *     FS4IRON/SULFUR CLUSTER S - 180
1aa6_*_1771aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE S - 180
1aa6_*_1771aa6   *     FS4IRON/SULFUR CLUSTER H - 181
1aa6_*_1771aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE H - 181
1aa6_*_1771aa6   *     FS4IRON/SULFUR CLUSTER P - 182
1aa6_*_1771aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE P - 182
1aa6_*_1771aa6   *     FS4IRON/SULFUR CLUSTER I - 183
1aa6_*_1771aa6   *     FS4IRON/SULFUR CLUSTER V - 184
2nap_A_1772nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE T - 177
2nap_A_1772nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE E - 179
2nap_A_1772nap   A     FS4IRON/SULFUR CLUSTER A - 180
2nap_A_1772nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE A - 180
2nap_A_1772nap   A     FS4IRON/SULFUR CLUSTER V - 183
2nap_A_1772nap   A     FS4IRON/SULFUR CLUSTER L - 184

Clusters included in this Subclass
CLUSTER: HH.2.137