Information on SUBCLASS 1.3.6 |
Subclass Accession number: 8861
Subclass: 1.3.6 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 12.7 +/- 12.3 Average RMSD (Å) : 0.400 +/- 0.163 Consensus geometry
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Consensus Sequence: | pXGph |
(φψ)-conformation: | aalaa |
Pattern: | x | x | [FKM] | [AGIK] | [AKQR] | x | x | x | [DKRS] | x | [G] | [KRY] | [AFGT] | [ADS] | x | [AF] | [ANT] |
Conservation: | -0.653 | -0.953 | 0.115 | -0.825 | 0.204 | -0.525 | -0.112 | -0.653 | -0.010 | -0.525 | 3.418 | 0.485 | -0.567 | 0.403 | -0.525 | 0.345 | 0.377 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c96_A_274 | 1c96 | A | 274 | 290 | HRMKKYLSKTGRADIAN | HHHHHHHHHTT-HHHHH | aaaaaaaaaavaaaaaa |
1eu1_A_511 | 1eu1 | A | 513 | 529 | DIFAALAERLGKGAEFT | HHHHHHHHHTT-HHHHH | aaaaaaaaaavaaaaaa |
1gai_*_126 | 1gai | - | 136 | 152 | IGFGQWLLDNGYTSAAT | HHHHHHHHHTT-HHHHH | aaaaaaaaaavaaaaaa |
1k4g_A_340 | 1k4g | A | 358 | 374 | MQKIRDSISEGRFSQFA | HHHHHHHHHTT-HHHHH | aaaaaaaaaavaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eu1_A_511 | 1eu1 | A | MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | D - 511 |
1eu1_A_511 | 1eu1 | A | GLCGLUCOSE | D - 513 |
1eu1_A_511 | 1eu1 | A | CDCADMIUM ION | R - 521 |
1gai_*_126 | 1gai | * | MANALPHA-D-MANNOSE | E - 153 |
1k4g_A_340 | 1k4g | A | ZNZINC ION | H - 349 |
1k4g_A_340 | 1k4g | A | ZNZINC ION | N - 350 |
1k4g_A_340 | 1k4g | A | ZNZINC ION | A - 352 |
1k4g_A_340 | 1k4g | A | ZNZINC ION | F - 353 |
1k4g_A_340 | 1k4g | A | ZNZINC ION | Q - 356 |
Clusters included in this Subclass |
CLUSTER: HH.4.122 |