Information on SUBCLASS 1.4.2 |
Subclass Accession number: 8870
Subclass: 1.4.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 15.9 +/- 14.7 Average RMSD (Å) : 0.633 +/- 0.250 Consensus geometry
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Consensus Sequence: | XhGpX |
(φψ)-conformation: | aaeaa |
Pattern: | [dens] | [afi] | [afily] | [aekm] | [agklt] | [ILV] | [G] | [dknq] | [ADEN] | [aktv] | [AILVW] | [dknr] | [EKNRS] |
Conservation: | -0.335 | -0.504 | -0.470 | -0.301 | -0.861 | 0.979 | 2.998 | -0.373 | -0.064 | -0.364 | -0.420 | -0.408 | 0.123 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1exn_A_262 | 1exn | A | 268 | 280 | DAIAAVGQDVLDK | HHHHTT-HHHHHH | aaaaaaeaaaaaa |
1hyo_A_68 | 1hyo | A | 68 | 80 | NNFMGLGQAAWKE | HHHHHH-HHHHHH | aaaaaaeaaaaaa |
1j09_A_447 | 1j09 | A | 449 | 461 | EILALLGKERALR | HHHHHT-HHHHHH | aaaaaaeaaaaaa |
1k38_A_117 | 1k38 | A | 122 | 134 | LFAKEIGDDKARR | HHHHHH-HHHHHH | aaaaaaeaaaaaa |
1k7c_A_169 | 1k7c | A | 175 | 187 | SIYETLGNATVNS | HHHHHH-HHHHHH | aaaaaaeaaaaaa |
1m6k_A_117 | 1m6k | A | 122 | 134 | EITQKIGLNKIKN | HHHHHH-HHHHHH | aaaaaaeaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1exn_A_262 | 1exn | A | MSESELENOMETHIONINE | L - 262 |
1exn_A_262 | 1exn | A | MSESELENOMETHIONINE | C - 266 |
1exn_A_262 | 1exn | A | MSESELENOMETHIONINE | I - 270 |
1exn_A_262 | 1exn | A | MSESELENOMETHIONINE | F - 281 |
1exn_A_262 | 1exn | A | MSESELENOMETHIONINE | I - 285 |
1k38_A_117 | 1k38 | A | KCXLYSINE NZ-CARBOXYLIC ACID | V - 117 |
1k38_A_117 | 1k38 | A | KCXLYSINE NZ-CARBOXYLIC ACID | Y - 120 |
1k38_A_117 | 1k38 | A | KCXLYSINE NZ-CARBOXYLIC ACID | E - 121 |
1k7c_A_169 | 1k7c | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 182 |
1k7c_A_169 | 1k7c | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 183 |
1k7c_A_169 | 1k7c | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 186 |
1m6k_A_117 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | V - 117 |
1m6k_A_117 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | W - 118 |
1m6k_A_117 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | S - 120 |
1m6k_A_117 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | Q - 121 |
1m6k_A_117 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | E - 122 |
1m6k_A_117 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | I - 123 |
1m6k_A_117 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | K - 126 |
Clusters included in this Subclass |
CLUSTER: HH.2.73 |