Logo
Information on SUBCLASS 2.1.2
Subclass Accession number: 8884
Subclass: 2.1.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 34

Average sequence ID (%) : 12.1 +/- 14.3
Average RMSD (Å) : 0.500 +/- 0.197

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXhXXX
(φψ)-conformation: aappaa
Pattern: xx[afilvwy][adeknqrst][aegknqrst]x[ADEGPST][adenpqst][adegnpqs]xx
Conservation:-1.217-1.3570.2070.0940.3421.1571.9520.235-0.178-1.123-0.113
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1afr_A_761afr   A8595ERAKEIPDDYFHHHHTS-HHHHaaaaaxxaaaa
1ak0_*_31ak0   -1222VAQHYVSPEAAHHHHHS-HHHHaaaaaxxaaaa
1bxk_A_1031bxk   A114124AYWNALTEDKKHHHHTS-HHHHaaaaaxxaaaa
1ctt_*_61ctt   -717TAFAQLADNLQHHHHTS-HHHHaaaaaxxaaaa
1e5m_A_681e5m   A6979KEAKRMDRFCHHHHHTS-HHHHaaaaabxaaaa
1eb6_A_1481eb6   A149159DAATQLSAQDAHHHHTS-HHHHaaaaaxxaaaa
1ezf_A_1251ezf   A130140LEFRNLAEKYQHHHHTS-HHHHaaaaaxxaaaa
1f07_A_2131f07   A226236FIAAGSPPPVFHHHHT--HHHHaaaaaxxaaaa
1fm2_A_851fm2   A91101QWYAQQSPDFRHHHHTS-HHHHaaaaaxxaaaa
1gk9_A_751gk9   A8090AQIAALSPEDMHHHHT--HHHHaaaaaxxaaaa
1gkz_A_561gkz   A7787KGFRSLPFIIGHHHHTS-HHHHaaaaaxpaaaa
1gwe_A_4281gwe   A433443LVREVFSDQERHHHHTS-HHHHaaaaapxaaaa
1gy9_A_1311gy9   A133143AAYEALSVPFRHHHHTS-HHHHaaaaaxxaaaa
1gz7_A_2741gz7   A276286ACLRGLSQDTLHHHHTS-HHHHaaaaaxxaaaa
1h16_A_1441h16   A147157GVFDVYTPDILHHHHH--HHHHaaaaapbaaaa
1ih7_A_5241ih7   A528538EKIKKLSAKSLHHHTT-BHHHHaaaaaxxaaaa
1irx_A_5031irx   A505515SFLASLDRSFVHHHHTS-HHHHaaaaaxpaaaa
1j58_A_1681j58   A170180DWLAHTPKEVIHHHHTS-HHHHaaaaabpaaaa
1j7n_A_2791j7n   A280290HWSDSLSEEGRHHHHT--HHHHaaaaaxxaaaa
1jgt_A_4021jgt   A406416DLLVSLEAGLKHHHHHB-HHHHaaaaapxaaaa
1jqn_A_501jqn   A5868TTLQNLSNDELHHHHT--HHHHaaaaaxxaaaa
1jqo_A_781jqo   A8595AKLTGLAPADAHHHHHS-HHHHaaaaapxaaaa
1jvs_A_1501jvs   A154164AIFQSLPQPIQHHHHTS-HHHHaaaaaxxaaaa
1kew_A_1021kew   A113123KYWSALGEDKKHHHHTS-HHHHaaaaaxxaaaa
1llf_A_2741llf   A276286ACLRSASSDTLHHHHHS-HHHHaaaaaxxaaaa
1mxr_A_581mxr   A6070IDYQALPEHEKHHHHTS-HHHHaaaaaxxaaaa
1o20_A_31o20   A1626DVLRNATTREKHHHTT--HHHHaaaaaxxaaaa
1o7d_A_1211o7d   A126136RWWRQQTNATQHHHHTS-HHHHaaaaaxxaaaa
1ove_A_1841ove   A184194ATRWYRAPEIMHHHHTS-HHHHaaaaaxxaaaa
1p80_A_5061p80   A510520LFWLSQTPFEQHHHHHS-HHHHaaaaaxxaaaa
1qgd_A_5861qgd   A587597DAFDKQDAAYRHHHHTS-HHHHaaaaaxxaaaa
1qq9_A_1361qq9   A140150FYVNNLPSADRHHHHTS-HHHHaaaaaxxaaaa
1r2f_A_421r2f   A4353PAWQTLSAAEQHHHHTS-HHHHaaaaaxxaaaa
1tgo_A_3411tgo   A342352WDVSRSSTGNLHHHHT--HHHHaaaaabxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1afr_A_761afr   A     FE2FE (II) ION E - 105
1ak0_*_31ak0   *     ZNZINC ION H - 6
1ak0_*_31ak0   *     ZNZINC ION H - 15
1ak0_*_31ak0   *     ZNZINC ION Y - 16
1f07_A_2131f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID V - 223
1f07_A_2131f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID I - 227
1f07_A_2131f07   A     MPD2-METHYL-2,4-PENTANEDIOL P - 232
1f07_A_2131f07   A     MPD2-METHYL-2,4-PENTANEDIOL P - 234
1f07_A_2131f07   A     MPD2-METHYL-2,4-PENTANEDIOL V - 235
1f07_A_2131f07   A     MPD2-METHYL-2,4-PENTANEDIOL R - 238
1fm2_A_851fm2   A     MSESELENOMETHIONINE W - 92
1fm2_A_851fm2   A     MSESELENOMETHIONINE Q - 96
1gk9_A_751gk9   A     EDO1,2-ETHANEDIOL W - 103
1gkz_A_561gkz   A     XEXENON L - 68
1gkz_A_561gkz   A     XEXENON I - 72
1h16_A_1441h16   A     COACOENZYME A N - 145
1h16_A_1441h16   A     COACOENZYME A Q - 146
1h16_A_1441h16   A     COACOENZYME A V - 148
1h16_A_1441h16   A     COACOENZYME A F - 149
1h16_A_1441h16   A     COACOENZYME A D - 150
1h16_A_1441h16   A     COACOENZYME A V - 151
1h16_A_1441h16   A     COACOENZYME A Y - 152
1h16_A_1441h16   A     COACOENZYME A T - 153
1h16_A_1441h16   A     COACOENZYME A P - 154
1h16_A_1441h16   A     COACOENZYME A L - 157
1h16_A_1441h16   A     COACOENZYME A R - 158
1h16_A_1441h16   A     COACOENZYME A R - 160
1h16_A_1441h16   A     COACOENZYME A K - 161
1h16_A_1441h16   A     MGMAGNESIUM ION K - 161
1j58_A_1681j58   A     MGMAGNESIUM ION D - 170
1j58_A_1681j58   A     MGMAGNESIUM ION A - 173
1j58_A_1681j58   A     MGMAGNESIUM ION H - 174
1jgt_A_4021jgt   A     GOLGLYCEROL R - 402
1jgt_A_4021jgt   A     GOLGLYCEROL E - 403
1jgt_A_4021jgt   A     GOLGLYCEROL D - 406
1jqn_A_501jqn   A     ASPASPARTIC ACID E - 86
1jvs_A_1501jvs   A     MSESELENOMETHIONINE S - 150
1jvs_A_1501jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 150
1jvs_A_1501jvs   A     MSESELENOMETHIONINE A - 154
1jvs_A_1501jvs   A     MSESELENOMETHIONINE I - 155
1jvs_A_1501jvs   A     MSESELENOMETHIONINE S - 158
1mxr_A_581mxr   A     HGMERCURY (II) ION N - 76
1mxr_A_581mxr   A     FEFE (III) ION D - 84
1mxr_A_581mxr   A     FEFE (III) ION Q - 87
1o20_A_31o20   A     MSESELENOMETHIONINE L - 4
1o20_A_31o20   A     MSESELENOMETHIONINE A - 34
1o20_A_31o20   A     MSESELENOMETHIONINE L - 37
1o7d_A_1211o7d   A     NAGN-ACETYL-D-GLUCOSAMINE N - 133
1r2f_A_421r2f   A     FEFE (III) ION D - 67
1r2f_A_421r2f   A     FEFE (III) ION Q - 70
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AN - 145
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AQ - 146
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AF - 149
1h16_A_1441h16   A COACOA BINDING SITE FOR CHAIN AD - 150
1o7d_A_1211o7d   A GC1GLYCOSYLATION SITE 1N - 133

Clusters included in this Subclass
CLUSTER: HH.2.17
CLUSTER: HH.3.9
CLUSTER: HH.4.13
CLUSTER: HH.4.34