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Information on SUBCLASS 2.2.3
Subclass Accession number: 8919
Subclass: 2.2.3 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 21

Average sequence ID (%) : 10.2 +/- 12.4
Average RMSD (Å) : 0.476 +/- 0.221

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXphp
(φψ)-conformation: aalpaa
Pattern: xx[afilmwy][fiklv]xx[degkqr][adeknr][afgipvwy][dehnqrsty]x[agilmvw]x[adekqr]
Conservation:-1.118-1.107-0.1730.2120.546-0.3130.2452.184-0.6440.814-1.0730.221-1.1061.313
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a59_*_2791a59   -288301AMIKHYDRPEMLGLHHHHHTT-THHHHHaaaaaalbwaaaaa
1a8h_*_3871a8h   -392405RPLVRELKFHVALEHHHHHTT-HHHHHHaaaaaavbaaaaaa
1b4u_A_681b4u   A7184KAAVLARDYNAMIDHHHHHHT-HHHHHHaaaaaalbaaaaaa
1d2z_A_981d2z   A103116ALFKKLKLHNAMRLHHHHHTT-HHHHHHaaaaaalxaaaaaa
1eg9_B_5281eg9   B542555AHLLDIQAYRAWLEHHHHHTT-HHHHHHaaaaaavxaaaaaa
1eua_A_1891eua   A189202ADALEAGDYDRITKHHHHHTT-HHHHHHaaaaaalxaaaaaa
1f4l_A_4251f4l   A429442GEAWESREFGKAVRHHHHHTT-HHHHHHaaaaaavxaaaaaa
1g8k_A_5631g8k   A576589DMYQKDGKAEMAAQHHHHHTT-HHHHHHaaaaaavbaaaaaa
1gte_A_971gte   A101114ITSISNKNYYGAAKHHHHHTT-HHHHHHaaaaaavxaaaaaa
1ile_*_6751ile   -692705TEALEAYDPTTSARHHHHHTT-HHHHHHaaaaaalbaaaaaa
1ixm_A_151ixm   A4053KGNLSLQKYDRVFEHHHHHTT-HHHHHHaaaaaaUxaaaaaa
1jcl_A_1071jcl   A107120YRALMAGNEQVGFDHHHHHTT--HHHHHaaaaaavbaaaaaa
1lam_*_2051lam   -206219SWIEEQEMGSFLSVHHHHHTT-HHHHHHaaaaaalxaaaaaa
1msk_*_10691msk   -10741087DAFEAQHDDYNKIMHHHHHTT-HHHHHHaaaaaalxaaaaaa
1mxs_A_2011mxs   A201214SSWIKNGDWARIEAHHHHHTT-HHHHHHaaaaaavxaaaaaa
1mzh_A_1931mzh   A193206LSAFKSEKYDFVVEHHHHHTT-HHHHHHaaaaaavxaaaaaa
1o0y_A_1221o0y   A122135VGMLKAKEWEYVYEHHHHHTT-HHHHHHaaaaaavxaaaaaa
1obb_A_4191obb   A430443LEAFLTGDIRIIKEHHHHHH--HHHHHHaaaaaavxaaaaaa
1oh0_A_61oh0   A1730IELVDVGDIEAIVQHHHHHHT-HHHHHHaaaaaavxaaaaaa
1pa1_A_7641pa1   A777790GAKFIMGDSSVQDQHHHHHTT-TTHHHHaaaaaagxaaaaaa
5csm_A_1735csm   A177190TKLIKSKDVEGIMKHHHHHTT-HHHHHHaaaaaalxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a59_*_2791a59   *     COACOENZYME A M - 309
1a59_*_2791a59   *     COACOENZYME A K - 313
1eua_A_1891eua   A     ACTACETATE ION A - 189
1eua_A_1891eua   A     ACTACETATE ION L - 192
1eua_A_1891eua   A     ACTACETATE ION E - 193
1g8k_A_5631g8k   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 563
1gte_A_971gte   A     FS4IRON/SULFUR CLUSTER I - 97
1gte_A_971gte   A     FS4IRON/SULFUR CLUSTER K - 98
1gte_A_971gte   A     FS4IRON/SULFUR CLUSTER F - 100
1gte_A_971gte   A     FS4IRON/SULFUR CLUSTER I - 101
1msk_*_10691msk   *     SAMS-ADENOSYLMETHIONINE R - 1094
1msk_*_10691msk   *     SAMS-ADENOSYLMETHIONINE E - 1097
1msk_*_10691msk   *     SAMS-ADENOSYLMETHIONINE A - 1098
1msk_*_10691msk   *     SAMS-ADENOSYLMETHIONINE E - 1101
1msk_*_10691msk   *     ACTACETATE ION Y - 1102
1msk_*_10691msk   *     ACTACETATE ION L - 1103
1msk_*_10691msk   *     ACTACETATE ION R - 1106
1oh0_A_61oh0   A     EQUEQUILENIN Y - 16
1oh0_A_61oh0   A     EQUEQUILENIN I - 17
1oh0_A_61oh0   A     EQUEQUILENIN V - 20
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gte_A_971gte   A FA1FS4 BINDING SITE FOR CHAIN AI - 97
1oh0_A_61oh0   A AC1EQU BINDING SITE FOR CHAIN AY - 16

Clusters included in this Subclass
CLUSTER: HH.3.14
CLUSTER: HH.5.50