Information on SUBCLASS 2.2.16 |
Subclass Accession number: 8932
Subclass: 2.2.16 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 5.6 +/- 11.1 Average RMSD (Å) : 0.433 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXXXXh |
(φψ)-conformation: | aalpaa |
Pattern: | [GKS] | [LT] | [LVW] | [MWY] | [AGQ] | [FKT] | [DSV] | x | x | [LW] | [GIV] | x |
Conservation: | 0.251 | 1.021 | 0.251 | 1.880 | -0.020 | -0.699 | -0.699 | -1.106 | -1.378 | 1.354 | -0.428 | -0.428 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iib_A_81 | 1iib | A | 81 | 92 | SLLYGKVDGLGV | HHHHHTT-HHHH | aaaaaalxaaaa |
1l0l_K_8 | 1l0l | K | 31 | 42 | GLVWATDWRLIL | HHHHHHT-HHHH | aaaaaalpaaaa |
1m6k_A_108 | 1m6k | A | 109 | 120 | KTWMQFSVVWVS | HHHHHTT-HHHH | aaaaaalxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | W - 111 |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | M - 112 |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | F - 114 |
1m6k_A_108 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | F - 114 |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | S - 115 |
1m6k_A_108 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | S - 115 |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | V - 116 |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | V - 117 |
1m6k_A_108 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | V - 117 |
1m6k_A_108 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | W - 118 |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | S - 120 |
1m6k_A_108 | 1m6k | A | KCXLYSINE NZ-CARBOXYLIC ACID | Q - 121 |
1m6k_A_108 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | E - 122 |
1m6k_A_108 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | I - 123 |
1m6k_A_108 | 1m6k | A | MPD2-METHYL-2,4-PENTANEDIOL | K - 126 |
Clusters included in this Subclass |
CLUSTER: HH.2.165 |