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Information on SUBCLASS 2.3.3
Subclass Accession number: 8937
Subclass: 2.3.3 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 9.6 +/- 11.9
Average RMSD (Å) : 0.700 +/- 0.194

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXhpXp
(φψ)-conformation: aabpaa
Pattern: xxx[akmt]x[DNPRT]x[degkn]xx[akr]
Conservation:-0.554-0.551-0.5950.229-0.7451.328-0.8921.339-0.677-0.6651.782
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1djx_A_2031djx   A206216KMLTQRAEIDRHHHT--HHHHHaaaabbaaaaa
1itk_A_521itk   A5565EFQKLDLEAVKHHHH--HHHHHaaaaxxaaaaa
1j1u_A_1121j1u   A121131LALKTTLKRARHHHHS-HHHHHaaaabxaaaaa
1j79_A_2001j79   A201211QHLMFNRNHMLHHHH--HHHHHaaaabbaaaaa
1m6y_A_1801m6y   A187197VREALPSYEIRHHHHS-HHHHHaaaabxaaaaa
1n62_C_1041n62   C106116IRYMGTIGGNAHHHH-BHHHHHaaaaxbaaaaa
1q5n_A_591q5n   A5969AIDKIDFDALAHHHH--HHHHHaaaaxxaaaaa
1qsg_A_1041qsg   A104114YVNAVTREGFKHHHH--HHHHHaaaaxbaaaaa
1rlr_*_1181rlr   -119129LLEDYTEEEFKHHHHS-HHHHHaaaabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j1u_A_1121j1u   A     MGMAGNESIUM ION D - 113
1j1u_A_1121j1u   A     MGMAGNESIUM ION N - 117
1j1u_A_1121j1u   A     MGMAGNESIUM ION R - 120
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE N - 206
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE N - 208
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE H - 209
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE M - 210
1j79_A_2001j79   A     NCDN-CARBAMOYL-L-ASPARTATE L - 211
1m6y_A_1801m6y   A     MSESELENOMETHIONINE T - 180
1m6y_A_1801m6y   A     MSESELENOMETHIONINE L - 183
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE I - 106
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE M - 109
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE G - 110
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE T - 111
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE I - 112
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE G - 113
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE G - 114
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE N - 115
1n62_C_1041n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE A - 117
1qsg_A_1041qsg   A     GLCGLUCOSE I - 115
1qsg_A_1041qsg   A     GLCGLUCOSE I - 119
1qsg_A_1041qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 119
1qsg_A_1041qsg   A     TCLTRICLOSAN S - 120

Clusters included in this Subclass
CLUSTER: HH.2.49