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Information on SUBCLASS 2.3.5
Subclass Accession number: 8939
Subclass: 2.3.5 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 13.3 +/- 16.9
Average RMSD (Å) : 0.633 +/- 0.186

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XpXXhX
(φψ)-conformation: aabpaa
Pattern: [lpw][afgkl][kltv][dehr][ilty][adnp][lpvy][ael][et][ILV]
Conservation:-0.421-1.129-0.408-0.084-0.189-0.090-0.911-0.0050.8262.412
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e0t_A_2441e0t   A247256LGVEIPVEEVHHHHS-HHHHaaaabpaaaa
1f8m_A_3201f8m   A320329WKKHLDDATIHHHH--HHHHaaaabxaaaa
1gvf_A_531gvf   A5362TFKHIALEEIHHHHS-HHHHaaaabxaaaa
1k3p_A_731k3p   A7685LATDSNYLEVHHHHS-HHHHaaaabbaaaa
1m2k_A_381m2k   A3847LWNRYRPEELHHHHS-HHHHaaaaxbaaaa
1q44_A_1031q44   A103112PLLVTNPHLLHHHHS-HHHHaaaabxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL Y - 63
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL S - 67
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL S - 70
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL T - 71
1m2k_A_381m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE W - 39

Clusters included in this Subclass
CLUSTER: HH.1.63
CLUSTER: HH.2.110