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Information on SUBCLASS 2.3.11
Subclass Accession number: 8945
Subclass: 2.3.11 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.5 +/- 14.8
Average RMSD (Å) : 0.725 +/- 0.150

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXhXhp
(φψ)-conformation: aabpaa
Pattern: [ASTV][EFL][AEKM][HL]x[ADT][ILMP][EPQ]x[ILVY][EY][AKQ]
Conservation:-0.253-1.417-1.0310.593-0.350-0.015-0.5451.384-1.2260.5261.7480.585
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bdm_A_2081bdm   A208219ALELVDMEWYEKHHHHS-HHHHHHaaaabxaaaaaa
1eb7_A_1081eb7   A113124VEMHSTPQLVEQHHHHS-HHHHHHaaaabbaaaaaa
1gvf_A_531gvf   A5364TFKHIALEEIYAHHHHS-HHHHHHaaaabxaaaaaa
2a0b_*_6582a0b   -659670SEALLDIPMLEQHHHHS-HHHHHHaaaabxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eb7_A_1081eb7   A     HECHEME C P - 108
1eb7_A_1081eb7   A     CACALCIUM ION P - 108
1eb7_A_1081eb7   A     HECHEME C I - 109
1eb7_A_1081eb7   A     CACALCIUM ION I - 109
1eb7_A_1081eb7   A     HECHEME C S - 112
1eb7_A_1081eb7   A     CACALCIUM ION S - 112
1eb7_A_1081eb7   A     HECHEME C V - 113
1eb7_A_1081eb7   A     HECHEME C H - 116
1eb7_A_1081eb7   A     CACALCIUM ION H - 116
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL Y - 63
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL S - 67
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL S - 70
1gvf_A_531gvf   A     EGLETHYLENE GLYCOL T - 71
2a0b_*_6582a0b   *     ZNZINC ION L - 662
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1eb7_A_1081eb7   A 401LOW-POTENTIAL PEROXIDATIC HAEM CENTRE COVALENTLY LINKED TO CYS51 AND CYS54 AXIAL LIGANDS: HIS55 AND HIS71S - 112

Clusters included in this Subclass
CLUSTER: HH.1.79
CLUSTER: HH.3.105