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Information on SUBCLASS 2.8.1
Subclass Accession number: 8968
Subclass: 2.8.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 31.4 +/- 26.4
Average RMSD (Å) : 0.450 +/- 0.084

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XhGphp
(φψ)-conformation: aagbaa
Pattern: [ilv][nv][fkq][AIY][G][ST][flv][dnst][AE][stv]x[DEGK][an][aimw]
Conservation:-0.288-0.440-0.624-0.1842.9770.972-0.450-0.5360.814-0.382-0.380-0.112-0.459-0.908
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1iyx_A_3401iyx   A340353VNQIGTLTETFEAIHHHH-SHHHHHHHHaaaagbaaaaaaaa
1j11_A_1971j11   A208221LNKYGSLNEVNKAWHHHHSSHHHHHHHHaaaagbaaaaaaaa
1nj4_A_1121nj4   A120133DFAAGSQDAFVGLMHHHHSSHHHHHHHHaaaagbaaaaaaaa
1one_A_3461one   A346359VNQIGTLSESIKAAHHHHS-HHHHHHHHaaaagbaaaaaaaa
1pdz_*_3451pdz   -345358VNQIGSVTESIDAHHHHH-SHHHHHHHHaaaagbaaaaaaaa
1uet_A_1721uet   A179192IVFYGSFLETVKNAHHHHSSHHHHHHHHaaaagbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iyx_A_3401iyx   A     CRYPROPANE-1,2,3-TRIOL T - 345
1iyx_A_3401iyx   A     CRYPROPANE-1,2,3-TRIOL T - 347
1iyx_A_3401iyx   A     CRYPROPANE-1,2,3-TRIOL E - 348
1iyx_A_3401iyx   A     CRYPROPANE-1,2,3-TRIOL E - 351
1one_A_3461one   A     MGMAGNESIUM ION Q - 348
1one_A_3461one   A     PEPPHOSPHOENOLPYRUVATE Q - 348
1one_A_3461one   A     PAG2-PHOSPHO-D-GLYCERIC ACID Q - 348
1pdz_*_3451pdz   *     PGA2-PHOSPHOGLYCOLIC ACID Q - 347

Clusters included in this Subclass
CLUSTER: HH.1.54