Information on SUBCLASS 3.3.3 |
Subclass Accession number: 8982
Subclass: 3.3.3 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 12.9 +/- 17.4 Average RMSD (Å) : 0.857 +/- 0.288 Consensus geometry
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Consensus Sequence: | ppcXphX |
(φψ)-conformation: | aalppaa |
Pattern: | x | [avy] | x | x | x | [altv] | [aklmv] | [DEHNR] | x | [gil] | x | [DST] | [afilw] | [AEGR] | [DEKPR] | [GILV] | x | [aqr] | x | [fhi] |
Conservation: | -1.290 | 0.307 | -0.013 | -1.175 | -0.826 | 0.087 | -0.291 | 1.562 | -0.443 | 0.171 | -1.136 | 2.719 | -1.042 | 0.272 | 1.258 | 0.315 | -0.512 | 0.579 | -0.546 | 0.001 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dnp_A_341 | 1dnp | A | 347 | 366 | TASFLVKDLLIDWREGERYF | HHHHHHHTS---HHHHHHHH | aaaaaaaaalxpaaaaaaaa |
1ezm_*_265 | 1ezm | - | 271 | 290 | GVIRSAQNRNYSAADVTRAF | HHHHHHHHTT--HHHHHHHH | aaaaaaaaavbxaaaaaaaa |
1m5y_A_189 | 1m5y | A | 200 | 219 | RAIVDQARNGADFGKLAIAH | HHHHHHHHTT--HHHHHHHH | aaaaaaaaavpxaaaaaaaa |
1qnf_*_349 | 1qnf | - | 355 | 374 | VASFLTKDLIIDWRRGEQFF | HHHHHHHTS---HHHHHHHH | aaaaaaaaalbpaaaaaaaa |
1ujp_A_230 | 1ujp | A | 230 | 249 | SALVRALEEGRSLAPLLQEI | HHHHHHHHTT--HHHHHHHH | aaaaaaaaavxxaaaaaaaa |
1uok_*_386 | 1uok | - | 391 | 410 | MYKEKVMERGEDIEKVMQSI | HHHHHHHTS---HHHHHHHH | aaaaaaaaavxxaaaaaaaa |
2cb5_A_175 | 2cb5 | A | 190 | 209 | IRLRNLVHSGATKGEISATQ | HHHHHHHHTT--HHHHHHHH | aaaaaaaaavxxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dnp_A_341 | 1dnp | A | FADFLAVIN-ADENINE DINUCLEOTIDE | N - 341 |
1dnp_A_341 | 1dnp | A | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 342 |
1dnp_A_341 | 1dnp | A | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 344 |
1dnp_A_341 | 1dnp | A | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 345 |
1dnp_A_341 | 1dnp | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 348 |
1dnp_A_341 | 1dnp | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 366 |
1dnp_A_341 | 1dnp | A | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 367 |
1qnf_*_349 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | N - 349 |
1qnf_*_349 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 350 |
1qnf_*_349 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 352 |
1qnf_*_349 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 353 |
1qnf_*_349 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 356 |
1qnf_*_349 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 374 |
1qnf_*_349 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 375 |
1qnf_*_349 | 1qnf | * | HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE | M - 375 |
1ujp_A_230 | 1ujp | A | CITCITRIC ACID | S - 230 |
1ujp_A_230 | 1ujp | A | CITCITRIC ACID | A - 231 |
Clusters included in this Subclass |
CLUSTER: HH.4.40 |