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Information on SUBCLASS 3.3.3
Subclass Accession number: 8982
Subclass: 3.3.3 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 12.9 +/- 17.4
Average RMSD (Å) : 0.857 +/- 0.288

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: ppcXphX
(φψ)-conformation: aalppaa
Pattern: x[avy]xxx[altv][aklmv][DEHNR]x[gil]x[DST][afilw][AEGR][DEKPR][GILV]x[aqr]x[fhi]
Conservation:-1.2900.307-0.013-1.175-0.8260.087-0.2911.562-0.4430.171-1.1362.719-1.0420.2721.2580.315-0.5120.579-0.5460.001
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dnp_A_3411dnp   A347366TASFLVKDLLIDWREGERYFHHHHHHHTS---HHHHHHHHaaaaaaaaalxpaaaaaaaa
1ezm_*_2651ezm   -271290GVIRSAQNRNYSAADVTRAFHHHHHHHHTT--HHHHHHHHaaaaaaaaavbxaaaaaaaa
1m5y_A_1891m5y   A200219RAIVDQARNGADFGKLAIAHHHHHHHHHTT--HHHHHHHHaaaaaaaaavpxaaaaaaaa
1qnf_*_3491qnf   -355374VASFLTKDLIIDWRRGEQFFHHHHHHHTS---HHHHHHHHaaaaaaaaalbpaaaaaaaa
1ujp_A_2301ujp   A230249SALVRALEEGRSLAPLLQEIHHHHHHHHTT--HHHHHHHHaaaaaaaaavxxaaaaaaaa
1uok_*_3861uok   -391410MYKEKVMERGEDIEKVMQSIHHHHHHHTS---HHHHHHHHaaaaaaaaavxxaaaaaaaa
2cb5_A_1752cb5   A190209IRLRNLVHSGATKGEISATQHHHHHHHHTT--HHHHHHHHaaaaaaaaavxxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dnp_A_3411dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 341
1dnp_A_3411dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 342
1dnp_A_3411dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 344
1dnp_A_3411dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 345
1dnp_A_3411dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 348
1dnp_A_3411dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 366
1dnp_A_3411dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 367
1qnf_*_3491qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE N - 349
1qnf_*_3491qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE R - 350
1qnf_*_3491qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE R - 352
1qnf_*_3491qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE M - 353
1qnf_*_3491qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 356
1qnf_*_3491qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE F - 374
1qnf_*_3491qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE M - 375
1qnf_*_3491qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE M - 375
1ujp_A_2301ujp   A     CITCITRIC ACID S - 230
1ujp_A_2301ujp   A     CITCITRIC ACID A - 231

Clusters included in this Subclass
CLUSTER: HH.4.40