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Information on SUBCLASS 3.3.7
Subclass Accession number: 8986
Subclass: 3.3.7 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 7.8 +/- 10.7
Average RMSD (Å) : 0.475 +/- 0.050

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XpchXXp
(φψ)-conformation: aalppaa
Pattern: [EQTW]xxx[AGL]xxx[DGK][ALP]xx[DEK][EKQ][ILV]
Conservation:-0.132-0.748-0.167-0.193-0.047-0.871-0.810-0.6250.537-0.076-0.748-1.3031.5611.8011.821
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c4k_A_5491c4k   A561575QLQRLIEEDAPLKQVHHHHHHHTT-BHHHHaaaaaaaavxxaaaa
1d2z_A_551d2z   A5569WQQLATAVKLYPDQVHHHHHHHTT--HHHHaaaaaaaalxxaaaa
1pdo_*_951pdo   -100114ETLMARDDDPSFDELHHHHHHTT---HHHHaaaaaaaalwxaaaa
1t7p_A_5181t7p   A523537TFIYGFLYGAGDEKIHHHHHHHTT--HHHHaaaaaaaavxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE R - 518
1t7p_A_5181t7p   A     2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE K - 522
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE K - 522
1t7p_A_5181t7p   A     MGMAGNESIUM ION K - 522
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE T - 523
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE Y - 526
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE G - 527
1t7p_A_5181t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE Y - 530

Clusters included in this Subclass
CLUSTER: HH.4.98