Information on SUBCLASS 3.3.10 |
Subclass Accession number: 8989
Subclass: 3.3.10 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 36.2 +/- 30.5 Average RMSD (Å) : 0.867 +/- 0.379 Consensus geometry
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Consensus Sequence: | hXGhXXp |
(φψ)-conformation: | aalppaa |
Pattern: | x | [DG] | [HL] | [FL] | [GR] | [AD] | [LV] | [AF] | [GV] | [K] | [AP] | x | [G] | [LM] | [PS] | x | [EQ] | [DQ] | [AI] | [MV] | [AQT] | [LT] | [RS] |
Conservation: | -1.033 | 0.184 | -0.754 | 0.245 | -0.389 | -0.692 | 0.173 | -0.692 | -1.094 | 2.188 | 0.080 | -0.461 | 2.998 | 0.742 | -0.164 | -0.690 | 0.982 | 0.349 | -0.631 | 0.410 | -0.960 | -0.394 | -0.394 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1apx_A_138 | 1apx | A | 138 | 160 | SDHLRDVFGKAMGLSDQDIVALS | HHHHHHHHTTTS---HHHHHHHH | aaaaaaaaaaaavxxaaaaaaaa |
1l0g_A_152 | 1l0g | A | 155 | 177 | IGLFGALAVKPSGLSFEQAMQTR | HHHHHHHHTGGG-S-HHHHHHHH | aaaaaaaaaaaavxxaaaaaaaa |
2blt_A_152 | 2blt | A | 155 | 177 | IGLFGALAVKPSGMPYEQAMTTR | HHHHHHHHTGGG-S-HHHHHHHH | aaaaaaaaaaaavxxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1apx_A_138 | 1apx | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 141 |
1apx_A_138 | 1apx | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 145 |
1apx_A_138 | 1apx | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 156 |
1apx_A_138 | 1apx | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 158 |
1apx_A_138 | 1apx | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 159 |
1apx_A_138 | 1apx | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 160 |
1l0g_A_152 | 1l0g | A | SUCSUCROSE | N - 152 |
1l0g_A_152 | 1l0g | A | PO4PHOSPHATE ION | N - 152 |
Clusters included in this Subclass |
CLUSTER: HH.6.104 |