Information on SUBCLASS 3.4.2 |
Subclass Accession number: 8996
Subclass: 3.4.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 17 Average sequence ID (%) : 13.6 +/- 16.9 Average RMSD (Å) : 0.871 +/- 0.242 Consensus geometry
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Consensus Sequence: | XpXXpXX |
(φψ)-conformation: | aapapaa |
Pattern: | x | x | x | x | x | [aest] | x | [dest] | [dehpst] | x | [aegkst] | [aekqrs] | x |
Conservation: | -0.879 | -0.999 | 0.330 | -0.262 | -0.646 | 1.034 | -0.605 | 2.097 | 0.607 | -0.533 | -0.336 | 1.325 | -1.132 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aqf_E_17 | 1aqf | E | 17 | 29 | LHAAMADTFLEHM | HHHHT-SSHHHHH | aaaaaxabaaaaa |
1azw_A_174 | 1azw | A | 179 | 191 | HRRLTSDDEATRL | HHHHT-S-HHHHH | aaaaaxaxaaaaa |
1cm8_A_247 | 1cm8 | A | 248 | 260 | EFVQRLQSDEAKN | HHHHT-S-HHHHH | aaaaapaxaaaaa |
1dbt_A_215 | 1dbt | A | 215 | 227 | RSITKAEDPVKAY | HHHHTSS-HHHHH | aaaaaxabaaaaa |
1j7n_A_168 | 1j7n | A | 175 | 187 | NTIKNASDSDGQD | HHHHTSSSSHHHH | aaaaaxaxaaaaa |
1j7n_A_733 | 1j7n | A | 741 | 753 | FRLMHSTDHAERL | HHHHT-SSHHHHH | aaaaaxaxaaaaa |
1m0u_A_128 | 1m0u | A | 149 | 161 | AVVSYEPEDEIKE | HHHHT-SSHHHHH | aaaaapaxaaaaa |
1oaa_*_205 | 1oaa | - | 209 | 221 | LARETSKDPELRS | HHHHH-S-HHHHH | aaaaapaxaaaaa |
1poc_*_61 | 1poc | - | 69 | 81 | DCLKNSADTISSY | HHHHT-S-HHHHH | aaaaaxaxaaaaa |
1q6o_A_192 | 1q6o | A | 192 | 204 | RSIRDAASPVEAA | HHHHTSS-HHHHH | aaaaaxabaaaaa |
1qht_A_448 | 1qht | A | 465 | 477 | RKMKATVDPLEKK | HHHHT---HHHHH | aaaaabaxaaaaa |
1qsa_A_572 | 1qsa | A | 574 | 586 | AFVESIPFSETRG | HHHHH-S-HHHHH | aaaaapaxaaaaa |
1qtr_A_177 | 1qtr | A | 182 | 194 | RQRLTSADPQVQL | HHHHT-S-HHHHH | aaaaaxaxaaaaa |
1r2f_A_129 | 1r2f | A | 139 | 151 | LAHYVSDEPLKKK | HHHHHSS-HHHHH | aaaaaxabaaaaa |
1r2f_A_74 | 1r2f | A | 77 | 89 | SLMADAITPHEEA | HHHTT-SSHHHHH | aaaaaxabaaaaa |
1tgo_A_448 | 1tgo | A | 465 | 477 | KKMKATIDPIEKK | HHHHH---HHHHH | aaaaaxaxaaaaa |
2tps_A_209 | 2tps | A | 209 | 221 | SAISQAEDPESAA | HHHHTSS-HHHHH | aaaaaxabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.3.48 |
CLUSTER: HH.4.31 |
CLUSTER: HH.5.121 |
CLUSTER: HH.5.20 |
CLUSTER: HH.5.40 |