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Information on SUBCLASS 0.1.9
Subclass Accession number: 9
Subclass: 0.1.9 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 7.7 +/- 12.8
Average RMSD (Å) : 0.614 +/- 0.110

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXXp
(φψ)-conformation: aabb
Pattern: xxxxx[adenrst][FGILMTV]x
Conservation:0.486-1.612-0.195-0.6620.1390.2251.619-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ax4_A_4571ax4   A457464RHFTARLKHHHH-EEEaaaapxbb
1eke_A_461eke   A5663LENLGYVEHHHHSEEEaaaabbbb
1g61_A_20151g61   A20152021IGVLALT.HHHH-EE.aaaabbb.
1g62_A_591g62   A5965IGRMTAG.HHHH-EE.aaaabbe.
1j0h_A_5011j0h   A502509SLRRGEISHHHH-EEEaaaaxxbb
1j3b_A_801j3b   A93100YLSERDLYHHHTS-EEaaaabpbb
1ji2_A_4981ji2   A499506SLTRGNVRHHHH-EEEaaaaxxbb
1khb_A_1641khb   A170176MRIMTRM.HHHHSEE.aaaabxb.
1kl1_A_1311kl1   A132139SGVQYNFVHHHHSEEEaaaabxxb
1lst_*_751lst   -7783RQQEIAF.HHHH-EE.aaaabbb.
1p1j_A_1091p1j   A109116MTQCSTLKHHHH-EEEaaaabbbx
1pam_A_4021pam   A403410AIAYGSTHHHHH-EEEaaaaxxbb
1qho_A_4031qho   A404411AIQYGTTTHHHH-EEEaaaaxxbb
1vhx_A_421vhx   A4855LIKDYTIDHHTTSEEEaaaabbxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eke_A_461eke   A     MSESELENOMETHIONINE R - 65
1j3b_A_801j3b   A     GOLGLYCEROL Y - 93
1j3b_A_801j3b   A     GOLGLYCEROL R - 97
1qho_A_4031qho   A     MALMALTOSE Q - 412
1qho_A_4031qho   A     MALMALTOSE R - 413
1qho_A_4031qho   A     MALMALTOSE W - 414
1qho_A_4031qho   A     MALMALTOSE I - 415

Clusters included in this Subclass
CLUSTER: HE.2.21