Logo
Information on SUBCLASS 3.5.1
Subclass Accession number: 9002
Subclass: 3.5.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 15.3 +/- 18.2
Average RMSD (Å) : 0.388 +/- 0.173

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXXXcXX
(φψ)-conformation: aallpaa
Pattern: [afiklmv][AFGLMVY][aekqrt]x[chkstwy][adegnq][gknrs][DHNS][ailptv]x[adknqst][acfimtv]
Conservation:0.366-0.066-0.366-0.793-0.4890.0670.9392.574-0.443-1.346-0.5700.126
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a5t_*_1841a5t   -190201ALRLSAGSPGAAHHHHTTT-HHHHaaaaavvxaaaa
1bud_A_161bud   A1829MVKKYNGDSDSIHHHHTTT-HHHHaaaaalvxaaaa
1e6y_B_21941e6y   B21972208VAAISNRNAMNAHHHHTTT-HHHHaaaaalvxaaaa
1e94_A_501e94   A6374KLEMHQGHLVKAHHHTTTT-HHHHaaaaalvxaaaa
1g3k_A_501g3k   A6374KLEMHQGHLLKSHHHHTTT-HHHHaaaaalvxaaaa
1g3m_A_501g3m   A5869YMIYKEGDVEKCHHHHTTT-HHHHaaaaalvxaaaa
1hbn_B_1971hbn   B200211VVAATLKNTLQAHHHHTTT-HHHHaaaaavvxaaaa
1iag_*_161iag   -1829VFMKYNSDLNIIHHHHTTT-HHHHaaaaallbaaaa
1j0h_A_4281j0h   A428439ILTVCGGDIRKVHHHHTTT-HHHHaaaaavvxaaaa
1jfz_A_1021jfz   A116127VYIDSGRDANFTHHHHTTS-HHHHaaaaavlxaaaa
1ji1_A_4761ji1   A476487FATRSGGDLWKTHHHHTTT-HHHHaaaaavvxaaaa
1ji2_A_4251ji2   A425436FLTSCGGNEAKFHHHHTTT-HHHHaaaaalvxaaaa
1kcz_A_2421kcz   A243254IGAAFDVDIKAMHHHHTTT-HHHHaaaaallxaaaa
1m4y_A_501m4y   A6374KLREWGGNLTKAHHHHTTT-HHHHaaaaalvxaaaa
1nd1_A_161nd1   A1829IFTKYNSNLNTIHHHHTTT-HHHHaaaaallbaaaa
1njg_A_2001njg   A206217LARAAEGSLRDAHHHHHTT-HHHHaaaaalvxaaaa
1qsa_A_5231qsa   A537548VYQQFGNNRIFSHHHHTTS-HHHHaaaaavlbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID R - 2203
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID N - 2204
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID A - 2205
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID M - 2206
1g3m_A_501g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE T - 50
1g3m_A_501g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL T - 50
1g3m_A_501g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE T - 51
1g3m_A_501g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE W - 52
1hbn_B_1971hbn   B     GOLGLYCEROL F - 224
1jfz_A_1021jfz   A     MNMANGANESE (II) ION T - 103
1jfz_A_1021jfz   A     MNMANGANESE (II) ION G - 106
1jfz_A_1021jfz   A     MNMANGANESE (II) ION D - 107
1jfz_A_1021jfz   A     MNMANGANESE (II) ION E - 110
1qsa_A_5231qsa   A     GOLGLYCEROL Y - 533
1qsa_A_5231qsa   A     GOLGLYCEROL R - 545
1qsa_A_5231qsa   A     GOLGLYCEROL A - 551
1qsa_A_5231qsa   A     GOLGLYCEROL Y - 552
1qsa_A_5231qsa   A     GOLGLYCEROL N - 553

Clusters included in this Subclass
CLUSTER: HH.3.28
CLUSTER: HH.4.129
CLUSTER: HH.4.21
CLUSTER: HH.5.10