Information on SUBCLASS 3.9.2 |
Subclass Accession number: 9012
Subclass: 3.9.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.7 +/- 11.4 Average RMSD (Å) : 0.733 +/- 0.058 Consensus geometry
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Consensus Sequence: | pppXXXp |
(φψ)-conformation: | aapppaa |
Pattern: | [EKS] | [AE] | [AL] | [KNR] | [ADV] | [FLW] | x | x | [FKY] | x | [GNR] | [DES] | [EHT] | [RY] | [EKS] | x | [DPT] | [AEQ] | [EN] | [VY] | [KL] | [ADG] | x | [IL] |
Conservation: | 0.270 | 0.789 | 0.207 | 0.879 | -1.555 | 0.726 | -0.947 | -1.859 | -0.034 | -1.403 | -0.186 | 0.726 | -0.338 | 0.708 | 0.270 | -1.403 | -0.338 | -0.034 | 1.795 | 0.704 | 0.241 | -0.643 | -0.643 | 2.070 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a59_*_60 | 1a59 | - | 61 | 84 | SELKAFVNFERSHRKLDENVKGAI | HHHHHHHHHHHTS-S--HHHHHHH | aaaaaaaaaaaaaapxxaaaaaaa |
1o7x_A_59 | 1o7x | A | 60 | 83 | KELNDLKAKLNEEYEVPQEVLDTI | HHHHHHHHHHHT-----HHHHHHH | aaaaaaaaaaaaaapbpaaaaaaa |
1xva_A_25 | 1xva | A | 25 | 48 | EAARVWQLYIGDTRSRTAEYKAWL | HHHHHHHHHHHTT--B-HHHHHHH | aaaaaaaaaaaaaabxxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1xva_A_25 | 1xva | A | ACTACETATE ION | W - 30 |
1xva_A_25 | 1xva | A | SAMS-ADENOSYLMETHIONINE | Y - 33 |
1xva_A_25 | 1xva | A | ACTACETATE ION | Y - 33 |
1xva_A_25 | 1xva | A | SAMS-ADENOSYLMETHIONINE | I - 34 |
1xva_A_25 | 1xva | A | ACTACETATE ION | I - 34 |
1xva_A_25 | 1xva | A | SAMS-ADENOSYLMETHIONINE | T - 37 |
1xva_A_25 | 1xva | A | SAMS-ADENOSYLMETHIONINE | R - 38 |
1xva_A_25 | 1xva | A | SAMS-ADENOSYLMETHIONINE | Y - 44 |
Clusters included in this Subclass |
CLUSTER: HH.5.162 |