Information on SUBCLASS 4.3.1 |
Subclass Accession number: 9040
Subclass: 4.3.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 15.1 +/- 16.0 Average RMSD (Å) : 0.538 +/- 0.290 Consensus geometry
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Consensus Sequence: | phchpcXX |
(φψ)-conformation: | aabaapaa |
Pattern: | [afilv] | [adegknqr] | x | [aciltv] | x | [deknqrt] | [afilmv] | [ilv] | [egknr] | [ailv] | [adekn] | [apsv] | [adegkrst] | [dny] | x | x | [agivy] | x | x | [efhkqry] | x |
Conservation: | 0.751 | -0.841 | -1.286 | -0.140 | -1.090 | -0.443 | 0.212 | 1.217 | 0.215 | 0.318 | 0.952 | 2.257 | -0.401 | 1.873 | -1.250 | -1.168 | 0.029 | -0.005 | -1.154 | -0.208 | 0.163 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a17_*_112 | 1a17 | - | 116 | 136 | LRDYETVVKVKPHDKDAKMKY | HHHHHHHHHHSTT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1a17_*_44 | 1a17 | - | 48 | 68 | IKFYSQAIELNPSNAIYYGNR | HHHHHHHHHHSTT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1a17_*_78 | 1a17 | - | 82 | 102 | LGDATRAIELDKKYIKGYYRR | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1ihg_A_289 | 1ihg | A | 293 | 313 | VDSCLEALEIDPSNTKALYRR | HHHHHHHHTT-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1ihg_A_323 | 1ihg | A | 327 | 347 | LADLKKAQEIAPEDKAIQAEL | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1kt0_A_333 | 1kt0 | A | 337 | 357 | VECCDKALGLDSANEKGLYRR | HHHHHHHHHHSTT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1ld8_A_114 | 1ld8 | A | 117 | 137 | FKLTRDAIELNAANYTVWHFR | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1ld8_A_185 | 1ld8 | A | 186 | 206 | LEFIADILNQDAKNYHAWQHR | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaapaaaaaaa |
1ld8_A_219 | 1ld8 | A | 220 | 240 | LQYVDQLLKEDVRNNSVWNQR | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1ld8_A_253 | 1ld8 | A | 260 | 280 | VQYTLEMIKLVPHNESAWNYL | HHHHHHHHHHSTT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1pjr_*_390 | 1pjr | - | 394 | 414 | DILAYLRVIANPDDDLSLLRI | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1qh5_A_176 | 1qh5 | A | 177 | 197 | INNLKFARHVEPGNAAIREKL | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
1qsa_A_55 | 1qsa | A | 55 | 75 | AVTVTNFVRANPTLPPARTLQ | HHHHHHHHHH-TT-HHHHHHH | aaaaaaaaaabaaxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ld8_A_185 | 1ld8 | A | FPPFARNESYL DIPHOSPHATE | D - 196 |
1ld8_A_185 | 1ld8 | A | FPPFARNESYL DIPHOSPHATE | K - 198 |
1ld8_A_185 | 1ld8 | A | FPPFARNESYL DIPHOSPHATE | N - 199 |
1ld8_A_185 | 1ld8 | A | FPPFARNESYL DIPHOSPHATE | Y - 200 |
1ld8_A_185 | 1ld8 | A | FPPFARNESYL DIPHOSPHATE | H - 201 |
1ld8_A_185 | 1ld8 | A | U49(20S)-19,20,21,22-TETRAHYDRO-19-OXO-5H-18,20-ETHANO-12,14-ETHENO-6,10-METHENO-18H-BENZ[D]IMIDAZO[4,3-K][1, 6,9,12]OXATRIAZA-CYCLOOCTADECOSINE-9-CARBONITRILE | H - 201 |
1ld8_A_219 | 1ld8 | A | SUCSUCROSE | Y - 241 |
1ld8_A_219 | 1ld8 | A | SUCSUCROSE | S - 245 |
1ld8_A_253 | 1ld8 | A | SUCSUCROSE | G - 282 |
1ld8_A_253 | 1ld8 | A | SUCSUCROSE | I - 283 |
1qh5_A_176 | 1qh5 | A | GTTGLUTATHIONE | N - 178 |
1qh5_A_176 | 1qh5 | A | GTTGLUTATHIONE | N - 179 |
Clusters included in this Subclass |
CLUSTER: HH.5.12 |