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Information on SUBCLASS 4.3.1
Subclass Accession number: 9040
Subclass: 4.3.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 15.1 +/- 16.0
Average RMSD (Å) : 0.538 +/- 0.290

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: phchpcXX
(φψ)-conformation: aabaapaa
Pattern: [afilv][adegknqr]x[aciltv]x[deknqrt][afilmv][ilv][egknr][ailv][adekn][apsv][adegkrst][dny]xx[agivy]xx[efhkqry]x
Conservation:0.751-0.841-1.286-0.140-1.090-0.4430.2121.2170.2150.3180.9522.257-0.4011.873-1.250-1.1680.029-0.005-1.154-0.2080.163
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a17_*_1121a17   -116136LRDYETVVKVKPHDKDAKMKYHHHHHHHHHHSTT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1a17_*_441a17   -4868IKFYSQAIELNPSNAIYYGNRHHHHHHHHHHSTT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1a17_*_781a17   -82102LGDATRAIELDKKYIKGYYRRHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1ihg_A_2891ihg   A293313VDSCLEALEIDPSNTKALYRRHHHHHHHHTT-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1ihg_A_3231ihg   A327347LADLKKAQEIAPEDKAIQAELHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1kt0_A_3331kt0   A337357VECCDKALGLDSANEKGLYRRHHHHHHHHHHSTT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1ld8_A_1141ld8   A117137FKLTRDAIELNAANYTVWHFRHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1ld8_A_1851ld8   A186206LEFIADILNQDAKNYHAWQHRHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaapaaaaaaa
1ld8_A_2191ld8   A220240LQYVDQLLKEDVRNNSVWNQRHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1ld8_A_2531ld8   A260280VQYTLEMIKLVPHNESAWNYLHHHHHHHHHHSTT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1pjr_*_3901pjr   -394414DILAYLRVIANPDDDLSLLRIHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1qh5_A_1761qh5   A177197INNLKFARHVEPGNAAIREKLHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
1qsa_A_551qsa   A5575AVTVTNFVRANPTLPPARTLQHHHHHHHHHH-TT-HHHHHHHaaaaaaaaaabaaxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ld8_A_1851ld8   A     FPPFARNESYL DIPHOSPHATE D - 196
1ld8_A_1851ld8   A     FPPFARNESYL DIPHOSPHATE K - 198
1ld8_A_1851ld8   A     FPPFARNESYL DIPHOSPHATE N - 199
1ld8_A_1851ld8   A     FPPFARNESYL DIPHOSPHATE Y - 200
1ld8_A_1851ld8   A     FPPFARNESYL DIPHOSPHATE H - 201
1ld8_A_1851ld8   A     U49(20S)-19,20,21,22-TETRAHYDRO-19-OXO-5H-18,20-ETHANO-12,14-ETHENO-6,10-METHENO-18H-BENZ[D]IMIDAZO[4,3-K][1, 6,9,12]OXATRIAZA-CYCLOOCTADECOSINE-9-CARBONITRILE H - 201
1ld8_A_2191ld8   A     SUCSUCROSE Y - 241
1ld8_A_2191ld8   A     SUCSUCROSE S - 245
1ld8_A_2531ld8   A     SUCSUCROSE G - 282
1ld8_A_2531ld8   A     SUCSUCROSE I - 283
1qh5_A_1761qh5   A     GTTGLUTATHIONE N - 178
1qh5_A_1761qh5   A     GTTGLUTATHIONE N - 179

Clusters included in this Subclass
CLUSTER: HH.5.12