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Information on SUBCLASS 4.3.2
Subclass Accession number: 9041
Subclass: 4.3.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 13.3 +/- 13.8
Average RMSD (Å) : 0.450 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXPcchX
(φψ)-conformation: aabaapaa
Pattern: x[LMTV]x[AKL][FHQY][P][DKN][DN][LPV][ADKQ]x[ALV]xx[AEKM]
Conservation:-0.641-0.011-0.676-0.3130.1293.1400.2601.182-0.290-0.361-0.501-0.033-0.711-0.711-0.466
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6v_A_2951e6v   A295309TMRKYPDDPAKVALEHHHH-TT-HHHHHHHaaaabaabaaaaaaa
1l5r_A_3971l5r   A414428IVALFPKDVDRLRRMHHHH-SS-HHHHHHHaaaabaaxaaaaaaa
1lhp_A_2331lhp   A244258WTHKHPNNLKVACEKHHHHSTT-HHHHHHHaaaabaabaaaaaaa
1un8_A_4781un8   A487501SLLAQPKNLQAAFDAHHHHSTT-HHHHHHHaaaabaaxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1un8_A_4781un8   A     MYY(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE L - 481
1un8_A_4781un8   A     MYY(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE L - 485
1un8_A_4781un8   A     MYY(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE L - 488
1un8_A_4781un8   A     MYY(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE P - 492
1un8_A_4781un8   A     MYY(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE K - 493
1un8_A_4781un8   A     MYY(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE L - 495
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1un8_A_4781un8   A AC1MYY BINDING SITE FOR CHAIN AP - 492

Clusters included in this Subclass
CLUSTER: HH.3.117