Information on SUBCLASS 4.6.1 |
Subclass Accession number: 9045
Subclass: 4.6.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 45.1 +/- 29.2 Average RMSD (Å) : 0.531 +/- 0.330 Consensus geometry
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Consensus Sequence: | ppXXhppp |
(φψ)-conformation: | aalpbbaa |
Pattern: | [pr] | [EQ] | [asv] | [AILT] | x | [dety] | [GKNQRS] | [dkrstw] | [AFMY] | [cgst] | [hknrst] | [aekqrs] | [CSV] | [DR] | [ILMVW] | [IW] | [agsv] | [AFLY] | [GS] | [CFIV] | [CILV] | [ILMT] | [ktwy] |
Conservation: | 0.300 | 1.539 | -0.613 | -0.145 | -1.155 | -0.880 | -0.575 | -1.350 | 0.240 | -0.697 | -0.953 | -0.724 | -0.177 | 1.147 | -0.134 | 2.969 | -0.569 | 0.011 | 1.523 | 0.040 | 0.158 | 0.192 | -0.146 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1byg_A_355 | 1byg | A | 355 | 377 | PEALREKKFSTKSDVWSFGILLW | HHHHHH----HHHHHHHHHHHHH | aaaaaavbbbaaaaaaaaaaaaa |
1fgk_A_669 | 1fgk | A | 669 | 691 | PEALFDRIYTHQSDVWSFGVLLW | HHHHHH----HHHHHHHHHHHHH | aaaaaalbbbaaaaaaaaaaaaa |
1fmk_*_431 | 1fmk | - | 431 | 453 | PEAALYGRFTIKSDVWSFGILLT | HHHHHH----HHHHHHHHHHHHH | aaaaaavxxbaaaaaaaaaaaaa |
1gjo_A_672 | 1gjo | A | 672 | 694 | PEALFDRVYTHQSDVWSFGVLMW | HHHHHSS---HHHHHHHHHHHHH | aaaaaalbbbaaaaaaaaaaaaa |
1gzk_A_319 | 1gzk | A | 319 | 341 | PEVLEDNDYGRAVDWWGLGVVMY | HHHHHH----THHHHHHHHHHHH | aaaaaalbxxaaaaaaaaaaaaa |
1h1w_A_251 | 1h1w | A | 251 | 273 | PELLTEKSACKSSDLWALGCIIY | HHHHHT----HHHHHHHHHHHHH | aaaaaalbbbaaaaaaaaaaaaa |
1jpa_A_803 | 1jpa | A | 803 | 825 | PEAIQYRKFTSASDVWSYGIVMW | HHHHHS----HHHHHHHHHHHHH | aaaaaalxxbaaaaaaaaaaaaa |
1k2p_A_566 | 1k2p | A | 566 | 588 | PEVLMYSKFSSKSDIWAFGVLMW | HHHHHH----HHHHHHHHHHHHH | aaaaaalxxbaaaaaaaaaaaaa |
1luf_A_770 | 1luf | A | 770 | 792 | PESIFYNRYTTESDVWAYGVVLW | HHHHHH----HHHHHHHHHHHHH | aaaaaalbbbaaaaaaaaaaaaa |
1mp8_A_591 | 1mp8 | A | 591 | 613 | PESINFRRFTSASDVWMFGVCMW | HHHHHH---SHHHHHHHHHHHHH | aaaaaalxbbaaaaaaaaaaaaa |
1mqb_A_786 | 1mqb | A | 786 | 808 | PEAISYRKFTSASDVWSFGIVMW | HHHHHS----HHHHHHHHHHHHH | aaaaaalxxbaaaaaaaaaaaaa |
1p4o_A_1151 | 1p4o | A | 1151 | 1173 | PESLKDGVFTTYSDVWSFGVVLW | HHHHHH----HHHHHHHHHHHHH | aaaaaavxbbaaaaaaaaaaaaa |
1qcf_A_431 | 1qcf | A | 431 | 453 | PEAINFGSFTIKSDVWSFGILLM | HHHHHH----HHHHHHHHHHHHH | aaaaaavxxbaaaaaaaaaaaaa |
1qnf_*_332 | 1qnf | - | 339 | 361 | RQLTETGWMHNRCRMIVASFLTK | HHHHHHS---HHHHHHHHHHHHH | aaaaaavbbpaaaaaaaaaaaaa |
1qpc_A_409 | 1qpc | A | 409 | 431 | PEAINYGTFTIKSDVWSFGILLT | HHHHHH----HHHHHHHHHHHHH | aaaaaavxbbaaaaaaaaaaaaa |
1r0p_A_1252 | 1r0p | A | 1252 | 1274 | LESLQTQKFTTKSDVWSFGVLLW | HHHHHH----HHHHHHHHHHHHH | aaaaaalxbbaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h1w_A_251 | 1h1w | A | SEPPHOSPHOSERINE | K - 257 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | W - 346 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 347 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 348 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | N - 349 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 350 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 352 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 353 |
1qnf_*_332 | 1qnf | * | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 356 |
1qpc_A_409 | 1qpc | A | PTRO-PHOSPHOTYROSINE | G - 415 |
1qpc_A_409 | 1qpc | A | PTRO-PHOSPHOTYROSINE | T - 416 |
1qpc_A_409 | 1qpc | A | PTRO-PHOSPHOTYROSINE | F - 417 |
1qpc_A_409 | 1qpc | A | PTRO-PHOSPHOTYROSINE | T - 418 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h1w_A_251 | 1h1w | A | AC1SEP BINDING SITE FOR CHAIN A | K - 257 |
Clusters included in this Subclass |
CLUSTER: HH.3.18 |
CLUSTER: HH.4.11 |