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Information on SUBCLASS 4.6.1
Subclass Accession number: 9045
Subclass: 4.6.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 45.1 +/- 29.2
Average RMSD (Å) : 0.531 +/- 0.330

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: ppXXhppp
(φψ)-conformation: aalpbbaa
Pattern: [pr][EQ][asv][AILT]x[dety][GKNQRS][dkrstw][AFMY][cgst][hknrst][aekqrs][CSV][DR][ILMVW][IW][agsv][AFLY][GS][CFIV][CILV][ILMT][ktwy]
Conservation:0.3001.539-0.613-0.145-1.155-0.880-0.575-1.3500.240-0.697-0.953-0.724-0.1771.147-0.1342.969-0.5690.0111.5230.0400.1580.192-0.146
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1byg_A_3551byg   A355377PEALREKKFSTKSDVWSFGILLWHHHHHH----HHHHHHHHHHHHHaaaaaavbbbaaaaaaaaaaaaa
1fgk_A_6691fgk   A669691PEALFDRIYTHQSDVWSFGVLLWHHHHHH----HHHHHHHHHHHHHaaaaaalbbbaaaaaaaaaaaaa
1fmk_*_4311fmk   -431453PEAALYGRFTIKSDVWSFGILLTHHHHHH----HHHHHHHHHHHHHaaaaaavxxbaaaaaaaaaaaaa
1gjo_A_6721gjo   A672694PEALFDRVYTHQSDVWSFGVLMWHHHHHSS---HHHHHHHHHHHHHaaaaaalbbbaaaaaaaaaaaaa
1gzk_A_3191gzk   A319341PEVLEDNDYGRAVDWWGLGVVMYHHHHHH----THHHHHHHHHHHHaaaaaalbxxaaaaaaaaaaaaa
1h1w_A_2511h1w   A251273PELLTEKSACKSSDLWALGCIIYHHHHHT----HHHHHHHHHHHHHaaaaaalbbbaaaaaaaaaaaaa
1jpa_A_8031jpa   A803825PEAIQYRKFTSASDVWSYGIVMWHHHHHS----HHHHHHHHHHHHHaaaaaalxxbaaaaaaaaaaaaa
1k2p_A_5661k2p   A566588PEVLMYSKFSSKSDIWAFGVLMWHHHHHH----HHHHHHHHHHHHHaaaaaalxxbaaaaaaaaaaaaa
1luf_A_7701luf   A770792PESIFYNRYTTESDVWAYGVVLWHHHHHH----HHHHHHHHHHHHHaaaaaalbbbaaaaaaaaaaaaa
1mp8_A_5911mp8   A591613PESINFRRFTSASDVWMFGVCMWHHHHHH---SHHHHHHHHHHHHHaaaaaalxbbaaaaaaaaaaaaa
1mqb_A_7861mqb   A786808PEAISYRKFTSASDVWSFGIVMWHHHHHS----HHHHHHHHHHHHHaaaaaalxxbaaaaaaaaaaaaa
1p4o_A_11511p4o   A11511173PESLKDGVFTTYSDVWSFGVVLWHHHHHH----HHHHHHHHHHHHHaaaaaavxbbaaaaaaaaaaaaa
1qcf_A_4311qcf   A431453PEAINFGSFTIKSDVWSFGILLMHHHHHH----HHHHHHHHHHHHHaaaaaavxxbaaaaaaaaaaaaa
1qnf_*_3321qnf   -339361RQLTETGWMHNRCRMIVASFLTKHHHHHHS---HHHHHHHHHHHHHaaaaaavbbpaaaaaaaaaaaaa
1qpc_A_4091qpc   A409431PEAINYGTFTIKSDVWSFGILLTHHHHHH----HHHHHHHHHHHHHaaaaaavxbbaaaaaaaaaaaaa
1r0p_A_12521r0p   A12521274LESLQTQKFTTKSDVWSFGVLLWHHHHHH----HHHHHHHHHHHHHaaaaaalxbbaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h1w_A_2511h1w   A     SEPPHOSPHOSERINE K - 257
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE W - 346
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE M - 347
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE H - 348
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE N - 349
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE R - 350
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE R - 352
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE M - 353
1qnf_*_3321qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 356
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE G - 415
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE T - 416
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE F - 417
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE T - 418
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h1w_A_2511h1w   A AC1SEP BINDING SITE FOR CHAIN AK - 257

Clusters included in this Subclass
CLUSTER: HH.3.18
CLUSTER: HH.4.11