Information on SUBCLASS 4.13.1 |
Subclass Accession number: 9059
Subclass: 4.13.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 52.2 +/- 18.9 Average RMSD (Å) : 0.400 +/- 0.141 Consensus geometry
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Consensus Sequence: | hpSPpShV |
(φψ)-conformation: | aapaapaa |
Pattern: | [DE] | [DE] | [V] | [FI] | [DEY] | [S] | [AP] | x | [NS] | [ILV] | [AV] | [FW] | [DEP] | [EQ] | [A] | [E] | [N] | [R] | [KLM] | [HW] | [AT] | x | [KM] | [A] | [IV] | [LM] | [AV] | x | [LTV] | [LM] |
Conservation: | 0.770 | 0.569 | 0.722 | -0.095 | -1.189 | 0.722 | 0.049 | -2.070 | -0.111 | -0.214 | -0.629 | 0.990 | -0.640 | 0.436 | 0.722 | 1.467 | 2.211 | 1.467 | -1.143 | 0.555 | -0.385 | -1.618 | -0.595 | 0.722 | 0.384 | 0.142 | -0.675 | -1.523 | -1.168 | 0.129 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1duv_G_302 | 1duv | G | 302 | 331 | DEVFESAASIVFDQAENRMHTIKAVMVATL | HHHHTSTTB-HHHHHHHHHHHHHHHHHHHH | aaaaaxaaxaaaaaaaaaaaaaaaaaaaaa |
1dxh_A_303 | 1dxh | A | 303 | 332 | EDVFESPYNIAFEQAENRMHTIKAILVSTL | HHHHTSTTB-HHHHHHHHHHHHHHHHHHHH | aaaaabaaxaaaaaaaaaaaaaaaaaaaaa |
1oth_A_313 | 1oth | A | 313 | 342 | DEVFYSPRSLVFPEAENRKWTIMAVMVSLL | HHHHTSTTB-HHHHHHHHHHHHHHHHHHHH | aaaaaxaaxaaaaaaaaaaaaaaaaaaaaa |
1pvv_A_280 | 1pvv | A | 280 | 309 | DDVIDSPNSVVWDQAENRLHAQKAVLALVM | HHHHTSTTB-HHHHHHHHHHHHHHHHHHHH | aaaaaxaaxaaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1duv_G_302 | 1duv | G | PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE | R - 319 |
1duv_G_302 | 1duv | G | MPD2-METHYL-2,4-PENTANEDIOL | A - 325 |
1duv_G_302 | 1duv | G | MPD2-METHYL-2,4-PENTANEDIOL | V - 328 |
1duv_G_302 | 1duv | G | MPD2-METHYL-2,4-PENTANEDIOL | A - 329 |
1duv_G_302 | 1duv | G | MPD2-METHYL-2,4-PENTANEDIOL | T - 330 |
1oth_A_313 | 1oth | A | PAON-(PHOSPHONOACETYL)-L-ORNITHINE | R - 330 |
Clusters included in this Subclass |
CLUSTER: HH.5.88 |