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Information on SUBCLASS 4.13.1
Subclass Accession number: 9059
Subclass: 4.13.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 52.2 +/- 18.9
Average RMSD (Å) : 0.400 +/- 0.141

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 45-90
Consensus Sequence: hpSPpShV
(φψ)-conformation: aapaapaa
Pattern: [DE][DE][V][FI][DEY][S][AP]x[NS][ILV][AV][FW][DEP][EQ][A][E][N][R][KLM][HW][AT]x[KM][A][IV][LM][AV]x[LTV][LM]
Conservation:0.7700.5690.722-0.095-1.1890.7220.049-2.070-0.111-0.214-0.6290.990-0.6400.4360.7221.4672.2111.467-1.1430.555-0.385-1.618-0.5950.7220.3840.142-0.675-1.523-1.1680.129
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1duv_G_3021duv   G302331DEVFESAASIVFDQAENRMHTIKAVMVATLHHHHTSTTB-HHHHHHHHHHHHHHHHHHHHaaaaaxaaxaaaaaaaaaaaaaaaaaaaaa
1dxh_A_3031dxh   A303332EDVFESPYNIAFEQAENRMHTIKAILVSTLHHHHTSTTB-HHHHHHHHHHHHHHHHHHHHaaaaabaaxaaaaaaaaaaaaaaaaaaaaa
1oth_A_3131oth   A313342DEVFYSPRSLVFPEAENRKWTIMAVMVSLLHHHHTSTTB-HHHHHHHHHHHHHHHHHHHHaaaaaxaaxaaaaaaaaaaaaaaaaaaaaa
1pvv_A_2801pvv   A280309DDVIDSPNSVVWDQAENRLHAQKAVLALVMHHHHTSTTB-HHHHHHHHHHHHHHHHHHHHaaaaaxaaxaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1duv_G_3021duv   G     PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE R - 319
1duv_G_3021duv   G     MPD2-METHYL-2,4-PENTANEDIOL A - 325
1duv_G_3021duv   G     MPD2-METHYL-2,4-PENTANEDIOL V - 328
1duv_G_3021duv   G     MPD2-METHYL-2,4-PENTANEDIOL A - 329
1duv_G_3021duv   G     MPD2-METHYL-2,4-PENTANEDIOL T - 330
1oth_A_3131oth   A     PAON-(PHOSPHONOACETYL)-L-ORNITHINE R - 330

Clusters included in this Subclass
CLUSTER: HH.5.88