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Information on SUBCLASS 4.15.1
Subclass Accession number: 9062
Subclass: 4.15.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 25.9 +/- 17.3
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XpSXLXpX
(φψ)-conformation: aapappaa
Pattern: xxx[NS]x[AIV][KV][NS][S]x[L][EPS][DE]x[ER][K]xx
Conservation:-0.954-0.728-0.8030.619-1.104-0.126-0.2490.6171.379-0.9541.379-0.4271.201-0.8030.5052.056-0.578-1.029
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4m_A_3191a4m   A325342LNINAAKSSFLPEEEKKEHHHHHHHTSS--HHHHHHaaaaaaaaxaxxaaaaaa
1io7_A_1841io7   A184201EVVSRVVNSNLSDIEKLGHHHHHHHTSS--HHHHHHaaaaaaaabaxxaaaaaa
1oks_A_41oks   A623VIRSIIKSSRLEEDRKRYHHHHHHHHS-S-HHHHHHaaaaaaaaxaxpaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 205
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 206
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 207
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 208
1oks_A_41oks   A     MSESELENOMETHIONINE R - 4
1oks_A_41oks   A     MSESELENOMETHIONINE I - 7
1oks_A_41oks   A     MSESELENOMETHIONINE R - 8
1oks_A_41oks   A     MSESELENOMETHIONINE I - 11
1oks_A_41oks   A     MSESELENOMETHIONINE K - 12
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID L - 16
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID E - 17
1oks_A_41oks   A     MSESELENOMETHIONINE R - 20
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID R - 20
1oks_A_41oks   A     MSESELENOMETHIONINE K - 21
1oks_A_41oks   A     MSESELENOMETHIONINE R - 22
1oks_A_41oks   A     MSESELENOMETHIONINE Y - 23
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID Y - 23
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oks_A_41oks   A NHENHE BINDING SITE FOR CHAIN AR - 20
1oks_A_41oks   A NHENHE BINDING SITE FOR CHAIN AY - 23

Clusters included in this Subclass
CLUSTER: HH.4.132