Information on SUBCLASS 4.15.1 |
Subclass Accession number: 9062
Subclass: 4.15.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 25.9 +/- 17.3 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | XpSXLXpX |
(φψ)-conformation: | aapappaa |
Pattern: | x | x | x | [NS] | x | [AIV] | [KV] | [NS] | [S] | x | [L] | [EPS] | [DE] | x | [ER] | [K] | x | x |
Conservation: | -0.954 | -0.728 | -0.803 | 0.619 | -1.104 | -0.126 | -0.249 | 0.617 | 1.379 | -0.954 | 1.379 | -0.427 | 1.201 | -0.803 | 0.505 | 2.056 | -0.578 | -1.029 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4m_A_319 | 1a4m | A | 325 | 342 | LNINAAKSSFLPEEEKKE | HHHHHHHTSS--HHHHHH | aaaaaaaaxaxxaaaaaa |
1io7_A_184 | 1io7 | A | 184 | 201 | EVVSRVVNSNLSDIEKLG | HHHHHHHTSS--HHHHHH | aaaaaaaabaxxaaaaaa |
1oks_A_4 | 1oks | A | 6 | 23 | VIRSIIKSSRLEEDRKRY | HHHHHHHHS-S-HHHHHH | aaaaaaaaxaxpaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1io7_A_184 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 205 |
1io7_A_184 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 206 |
1io7_A_184 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 207 |
1io7_A_184 | 1io7 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 208 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | R - 4 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | I - 7 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | R - 8 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | I - 11 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | K - 12 |
1oks_A_4 | 1oks | A | NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | L - 16 |
1oks_A_4 | 1oks | A | NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | E - 17 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | R - 20 |
1oks_A_4 | 1oks | A | NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | R - 20 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | K - 21 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | R - 22 |
1oks_A_4 | 1oks | A | MSESELENOMETHIONINE | Y - 23 |
1oks_A_4 | 1oks | A | NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | Y - 23 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oks_A_4 | 1oks | A | NHENHE BINDING SITE FOR CHAIN A | R - 20 |
1oks_A_4 | 1oks | A | NHENHE BINDING SITE FOR CHAIN A | Y - 23 |
Clusters included in this Subclass |
CLUSTER: HH.4.132 |