Logo
Information on SUBCLASS 4.16.1
Subclass Accession number: 9064
Subclass: 4.16.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 10.0 +/- 0.0
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 0-45 rho (°): 225-270
Consensus Sequence: pXXXXSXh
(φψ)-conformation: aapaapaa
Pattern: [IL][AD][LY][EL][V][GR][RS][LW][LY]x[NS][GT]x[NP][GT][S][FH][FV][NV][RT]
Conservation:0.913-0.7990.057-1.6562.055-0.514-0.5140.6280.057-1.0850.913-0.514-0.2280.057-0.5142.0550.913-0.228-1.370-0.228
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gx3_A_1861gx3   A187206IDLEVGSWYVSTHPGSHFVTHHHHHHHHHHHH-TT-HHHHaaaaaaaaaaaaxaaxaaaa
1k87_A_5501k87   A550569LAYLVRRLLENGANTSFVNRHHHHHHHHHHHH-TTSHHHHaaaaaaaaaaaaxaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1k87_A_5501k87   A     LACLACTIC ACID Y - 552
1k87_A_5501k87   A     LACLACTIC ACID R - 555
1k87_A_5501k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 556
1k87_A_5501k87   A     1PEPENTAETHYLENE GLYCOL R - 556
1k87_A_5501k87   A     LACLACTIC ACID R - 556
1k87_A_5501k87   A     1PEPENTAETHYLENE GLYCOL L - 557
1k87_A_5501k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 559
1k87_A_5501k87   A     1PEPENTAETHYLENE GLYCOL N - 560
1k87_A_5501k87   A     1PEPENTAETHYLENE GLYCOL G - 561
1k87_A_5501k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 562
1k87_A_5501k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 564
1k87_A_5501k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL T - 564
1k87_A_5501k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 565
1k87_A_5501k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 566
1k87_A_5501k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 567
1k87_A_5501k87   A     1PEPENTAETHYLENE GLYCOL V - 567
1k87_A_5501k87   A     1PEPENTAETHYLENE GLYCOL N - 568

Clusters included in this Subclass
CLUSTER: HH.3.185