Information on SUBCLASS 4.23.1 |
Subclass Accession number: 9072
Subclass: 4.23.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 32.8 +/- 25.2 Average RMSD (Å) : 0.500 +/- 0.216 Consensus geometry
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Consensus Sequence: | pXppPXXX |
(φψ)-conformation: | aaGbppaa |
Pattern: | [DKPQ] | [AER] | [AV] | [FILT] | [KS] | [AQ] | [LM] | [AEK] | [AKS] | [AIV] | x | [R] | [AQST] | [ENST] | [TVWY] | [ST] | [NS] | [P] | [DP] | [AST] | x | [AG] | [AQ] | [KRSW] | [AIV] | [TV] | [AL] | [EKT] | [AILT] | [L] |
Conservation: | -0.784 | -0.649 | 0.110 | -0.872 | 0.109 | 0.018 | 1.066 | -0.661 | -0.483 | -0.208 | -0.595 | 2.007 | -0.739 | -0.562 | -0.872 | 0.427 | 0.963 | 3.425 | 0.800 | -0.203 | -1.005 | 0.646 | -0.209 | -1.138 | -0.208 | 0.109 | -0.291 | -0.537 | -0.961 | 1.298 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ars_*_279 | 1ars | - | 281 | 310 | DRAFSQMKAAIRANYSNPPAHGASVVATIL | HHHHHHHHHHHHTTTSS--HHHHHHHHHHH | aaaaaaaaaaaaaaagbxxaaaaaaaaaaa |
1b5p_A_250 | 1b5p | A | 250 | 279 | KEVIKAMASVSRQSTTSPDTIAQWATLEAL | HHHHHHHHHHHHTTT-S--HHHHHHHHHHH | aaaaaaaaaaaaaaaGbxpaaaaaaaaaaa |
1yaa_A_276 | 1yaa | A | 281 | 310 | PAVTSQLAKIIRSEVSNPPAYGAKIVAKLL | HHHHHHHHHHHHTTTSS--HHHHHHHHHHH | aaaaaaaaaaaaaaaGbxpaaaaaaaaaaa |
2cst_A_277 | 2cst | A | 281 | 310 | QRVLSQMEKIVRTTWSNPPSQGARIVATTL | HHHHHHHHHHHHTTTSS--SHHHHHHHHHH | aaaaaaaaaaaaaaaGbxxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b5p_A_250 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 263 |
1b5p_A_250 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 264 |
1b5p_A_250 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 265 |
1yaa_A_276 | 1yaa | A | MAEMALEIC ACID | R - 292 |
1yaa_A_276 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | V - 295 |
1yaa_A_276 | 1yaa | A | MAEMALEIC ACID | S - 296 |
1yaa_A_276 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 296 |
1yaa_A_276 | 1yaa | A | MAEMALEIC ACID | N - 297 |
1yaa_A_276 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | N - 297 |
2cst_A_277 | 2cst | A | PLPPYRIDOXAL-5'-PHOSPHATE | W - 295 |
Clusters included in this Subclass |
CLUSTER: HH.7.27 |