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Information on SUBCLASS 4.23.1
Subclass Accession number: 9072
Subclass: 4.23.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 32.8 +/- 25.2
Average RMSD (Å) : 0.500 +/- 0.216

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXppPXXX
(φψ)-conformation: aaGbppaa
Pattern: [DKPQ][AER][AV][FILT][KS][AQ][LM][AEK][AKS][AIV]x[R][AQST][ENST][TVWY][ST][NS][P][DP][AST]x[AG][AQ][KRSW][AIV][TV][AL][EKT][AILT][L]
Conservation:-0.784-0.6490.110-0.8720.1090.0181.066-0.661-0.483-0.208-0.5952.007-0.739-0.562-0.8720.4270.9633.4250.800-0.203-1.0050.646-0.209-1.138-0.2080.109-0.291-0.537-0.9611.298
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ars_*_2791ars   -281310DRAFSQMKAAIRANYSNPPAHGASVVATILHHHHHHHHHHHHTTTSS--HHHHHHHHHHHaaaaaaaaaaaaaaagbxxaaaaaaaaaaa
1b5p_A_2501b5p   A250279KEVIKAMASVSRQSTTSPDTIAQWATLEALHHHHHHHHHHHHTTT-S--HHHHHHHHHHHaaaaaaaaaaaaaaaGbxpaaaaaaaaaaa
1yaa_A_2761yaa   A281310PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLHHHHHHHHHHHHTTTSS--HHHHHHHHHHHaaaaaaaaaaaaaaaGbxpaaaaaaaaaaa
2cst_A_2772cst   A281310QRVLSQMEKIVRTTWSNPPSQGARIVATTLHHHHHHHHHHHHTTTSS--SHHHHHHHHHHaaaaaaaaaaaaaaaGbxxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b5p_A_2501b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 263
1b5p_A_2501b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 264
1b5p_A_2501b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 265
1yaa_A_2761yaa   A     MAEMALEIC ACID R - 292
1yaa_A_2761yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 295
1yaa_A_2761yaa   A     MAEMALEIC ACID S - 296
1yaa_A_2761yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 296
1yaa_A_2761yaa   A     MAEMALEIC ACID N - 297
1yaa_A_2761yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 297
2cst_A_2772cst   A     PLPPYRIDOXAL-5'-PHOSPHATE W - 295

Clusters included in this Subclass
CLUSTER: HH.7.27