Logo
Information on SUBCLASS 4.25.1
Subclass Accession number: 9074
Subclass: 4.25.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 28.4 +/- 31.8
Average RMSD (Å) : 0.850 +/- 0.100

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: ppDXXchh
(φψ)-conformation: aapaalaa
Pattern: [ILV][EN][HMV][ACL][EFM][HQY][HRS][D][KPR][FKR][GK][ILV][FY][AK][ADK][AY][ER]
Conservation:0.3970.391-0.800-0.574-1.1200.024-0.4372.701-0.355-0.969-0.2080.3471.888-0.181-0.963-0.3990.258
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c8k_A_7591c8k   A762778VNMLMHHDRFKVFADYEHHHHHH--TT-HHHHHHaaaaaaaxaalaaaaaa
1l5r_A_7591l5r   A762778INMLFYHDRFKVFADYEHHHHHH--TT-HHHHHHaaaaaaaxaalaaaaaa
1m7g_A_1421m7g   A142158VEVAEQRDPKGLYKKARHHHHHTS-TT-HHHHHHaaaaaaabaavaaaaaa
1m8p_A_5061m8p   A506522LEHCEQSDKRGIYAAARHHHHHHH-SS-HHHHHHaaaaaaapaavaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c8k_A_7591c8k   A     CPB2-(2-CHLORO-PHENYL)-5,7-DIHYDROXY-8-(3-HYDROXY-1-METHYL-PIPERIDIN-4-YL)-4H-BENZOPYRAN-4-ONE R - 770
1c8k_A_7591c8k   A     CPB2-(2-CHLORO-PHENYL)-5,7-DIHYDROXY-8-(3-HYDROXY-1-METHYL-PIPERIDIN-4-YL)-4H-BENZOPYRAN-4-ONE F - 771
1l5r_A_7591l5r   A     RBFRIBOFLAVINE R - 770
1l5r_A_7591l5r   A     RBFRIBOFLAVINE F - 771
1m7g_A_1421m7g   A     AV2ADENOSINE-5'-DIPHOSPHATE-2',3'-VANADATE R - 148
1m7g_A_1421m7g   A     AV2ADENOSINE-5'-DIPHOSPHATE-2',3'-VANADATE P - 150
1m7g_A_1421m7g   A     ADXADENOSINE-5'-PHOSPHOSULFATE L - 153
1m8p_A_5061m8p   A     PPS3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE R - 515
1m8p_A_5061m8p   A     PPS3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE I - 517

Clusters included in this Subclass
CLUSTER: HH.5.72