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Information on SUBCLASS 4.27.1
Subclass Accession number: 9076
Subclass: 4.27.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 16.2
Average RMSD (Å) : 0.550 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XhpGXXpX
(φψ)-conformation: aapgppaa
Pattern: x[AEKS][EQS][LV][AER][AEKR][AGKQ][FLWY]x[G][KL][DGST]x[EG]x[AFLV]
Conservation:-0.742-0.3300.4680.677-0.126-0.285-0.6960.401-0.8333.237-0.222-0.467-0.9250.508-0.061-0.605
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b9b_A_1401b9b   A145160EKQVREGFYGLDKEEAHHHHHHHHTT--HHHHaaaaaaaapvbxaaaa
1eyq_A_581eyq   A5974VASLAAKWKGKSSEELHHHHHHHHTT--HHHHaaaaaaaaxvxxaaaa
1i6k_A_2531i6k   A253268IEELERQYEGKGYGVFHHHHHHHTTT--HHHHaaaaaaaapvxxaaaa
2btm_A_1382btm   A143158ASQVEKALAGLTPEQVHHHHHHHHTT--HHHHaaaaaaaapgxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i6k_A_2531i6k   A     MSESELENOMETHIONINE R - 286
1i6k_A_2531i6k   A     MSESELENOMETHIONINE Y - 287
1i6k_A_2531i6k   A     GOLGLYCEROL Y - 287
1i6k_A_2531i6k   A     MSESELENOMETHIONINE H - 288
1i6k_A_2531i6k   A     MSESELENOMETHIONINE H - 289

Clusters included in this Subclass
CLUSTER: HH.4.106